KEGG   Drosophila arizonae: 108610936
Entry
108610936         CDS       T05886                                 
Name
(RefSeq) superkiller viralicidic activity 2-like 2
  KO
K12598  ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
Organism
daz  Drosophila arizonae
Pathway
daz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:daz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108610936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:daz03019]
    108610936
   03041 Spliceosome [BR:daz03041]
    108610936
   03009 Ribosome biogenesis [BR:daz03009]
    108610936
   03016 Transfer RNA biogenesis [BR:daz03016]
    108610936
Enzymes [BR:daz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     108610936
Messenger RNA biogenesis [BR:daz03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     108610936
Spliceosome [BR:daz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    108610936
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    108610936
Ribosome biogenesis [BR:daz03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    108610936
Transfer RNA biogenesis [BR:daz03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    108610936
SSDB
Motif
Pfam: DSHCT MTR4_beta-barrel DEAD MTR4-like_stalk Helicase_C
Other DBs
NCBI-GeneID: 108610936
NCBI-ProteinID: XP_017858807
Position
3
AA seq 1065 aa
MDIEELFECFKEQPSQGIQLPLPVPFKKTTGKQTEKTESDDNKQRKAIKRESAAANADTS
DKEQTDENDVKEEDTKRQRVDVKEVDEIANDTSDNEVKNEKEDNAEELDDCAVDALRVRI
VTHQLVSPESCTHEVAAHPDQEYIPLQPFTGVPAKQYPFVLDPFQKQAILCIDNSQSVLV
SAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFEDVGLVTGDVTIN
PSASCLIMTTEILRNMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVRY
VFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKGQFK
EENFTTAMAVLANAGEAAKGDQKGRKGGIKGHNEGQTNIFKIVKMIMERHFAPVIIFSFS
KKDCEVYAMQMAKLDFNTVDEKKLVDEVFKNAMDVLSEDDRRLPQVENVLPLLRRGIGIH
HGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKDFRWISSG
EYIQMAGRAGRRGLDDKGIVILMIDEKVSPVVGREIVQGQADTLNSAFHLTYNMVLNLLR
VEEINPEYMLERSFYQFQNQATLPGLYDQVQQKTQQLEKIKIKDEHNIASYHNIRDQLEI
YGNKYREWMTKPQYLASFLQPGRLVKVSAGKHEYDWGLVLNFKRKQDLSRRNPLESEPGI
VIDVLLHVSEESAKTGDTEPCPPNERGCMEVVPVSNSLITQISSIRVYFPSDLRTADNRR
AVLKTIQEAKKRFPLGPPLLHPIKDMNIKDDEFRKIMDTIAQFEQLLEAHPLHKSPELDR
IHKRYIEKLKLQNEVKGLKAELKAARSLLQMDELKFRKRVLRRMGYCKPGDVIEFKGRVA
CELSSADELLITEMIFNGVFNDLTAPQAVALLSCFVCDEKSSEAPKSATELSGPLRSLQS
LARRIARVSTECKLNLDEESYVEKFKPYLMDVVLAWCNGSSFLNVCKMTDIFEGSIIRCM
RRLEELLRQLCQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL
NT seq 3198 nt   +upstreamnt  +downstreamnt
atggatatagaagagttatttgagtgctttaaggagcagccgtctcaaggtatacagtta
ccgttaccagtaccttttaaaaagacaacaggaaagcagacagagaaaactgagtcagat
gacaacaaacagcgaaaggcgatcaaacgcgaatctgctgcagctaatgcagataccagc
gacaaggagcaaactgatgaaaatgatgtaaaggaagaggataccaagcggcagcgtgtc
gatgtaaaagaagtagacgaaattgctaatgatacctcagacaacgaggtgaaaaatgaa
aaagaggacaatgcagaagagttagatgactgcgcagtggacgccctgcgcgttcgtatt
gttacccatcagctggtgtcgcccgagtcctgcacacacgaggtggccgcccatcctgac
caggagtatattcccttgcagccgttcacgggcgtgcctgctaagcaatatccgttcgtg
ctggatcccttccaaaagcaggcaattctctgcattgacaactcgcagagcgtcctggtg
tcggcccacacatcggcgggcaagactgtggtggcggaatatgccattgccaagtcgttg
gctgccaagcagcgcgtcatttataccactcccattaaagcgctctccaatcagaagttt
cgcgagttcacagatgagtttgaggacgttggtctggttacgggcgatgttaccatcaat
ccctccgcctcctgtctgattatgacaacggaaattctgcggaatatgctgtaccgcggc
agcgaaataatgcgcgaggtgggctgggtgatcttcgacgagattcattacatgcgtgac
aaggaacgtggagtggtgtgggaggagacactcatcctattgcccgacaatgttcgctac
gtctttctctcggccaccataccgaatgctcgacagtttgccgaatgggtttgccacctg
cacaagcagccctgccatgtggtctacacggattacagacccacgccgctgcagcactac
atcttcccagctggaggcgacggcatccacttgatcgtggacgagaagggacagttcaaa
gaggagaactttaccacagctatggcggtgctggccaacgcaggtgaggcagcgaagggc
gatcagaagggtcgcaagggtggcatcaagggccacaatgaaggccaaacaaatattttc
aagattgtcaagatgattatggagcgtcactttgcgcccgtcatcatcttctcgttcagc
aagaaggactgtgaggtgtacgctatgcaaatggccaagctggactttaatacggtcgac
gagaagaaactggtggatgaggtctttaagaatgccatggatgtgctctcggaggatgat
cgtcgcctgccgcaggtggaaaatgtgttgccattgctgcgtcgtggcattggcatccat
cacggcggactactccctattctcaaggagaccattgagattctgtttggcgagggcctg
atcaaggcgctcttcgcgacagagacctttgccatgggcctgaacatgccggcgcgtaca
gttctgtttacggcgccgcgcaaattcgacggcaaggactttcggtggatcagctcgggc
gagtatatccaaatggctggacgtgctggtcgtcgtggtctggatgacaagggcatcgtt
atactgatgattgatgagaaggtctccccggtggtggggcgtgaaattgtgcagggccaa
gcagacactcttaactcggccttccatctcacctacaacatggtgttaaatctgctgcgc
gtggaggaaatcaacccggagtatatgctcgagcgcagcttctatcagttccaaaaccag
gccacactgcccggcctatacgatcaggtgcagcagaagacacagcagctggagaaaatt
aagatcaaggacgagcacaatatcgcctcttatcataacatccgcgaccagctcgagatc
tacggcaacaagtaccgcgagtggatgaccaagccacagtatctggcgtcctttctgcag
ccagggcgactggtaaaagtctcggctggcaagcacgagtatgactggggtctggtattg
aactttaagaggaagcaagatctaagtcgcaggaacccattggagagtgaaccgggcatt
gtcatcgatgtgctgctccatgtcagcgaggagtcggccaaaacaggcgacaccgagccc
tgtccgcccaacgagcgtggctgcatggaggttgttcccgtatccaattccctcatcacc
caaattagctcgatacgcgtctactttcccagcgatctgcgtacggctgacaatcgccgg
gccgtgttgaagaccatacaggaggcgaagaaacgattcccactcggaccacccttgctc
catcccatcaaggacatgaacattaaggatgacgaattccgcaaaatcatggacacaatc
gcacagttcgagcagctgctcgaggcgcatcccttgcacaagtcgccggagctggatcgc
attcacaagcgctacattgagaagctaaagctgcagaatgaggtgaagggcctcaaggca
gagctgaaagctgcccgcagcttgctgcaaatggacgagttgaaattccgcaaacgtgtg
ctccggcgcatgggctactgtaagccgggcgatgtcatcgagttcaaaggtcgcgttgcc
tgcgagctgagctccgcggatgagctgctcatcactgaaatgatattcaatggcgtcttc
aacgacctcaccgctccgcaagctgtggcgctgctctcctgcttcgtctgcgacgagaag
tccagcgaggcgccaaagagcgccaccgagctgtccggcccgttgcgctccctgcaaagc
ttggcgcgtcgcattgccagggtgtccaccgaatgcaagctgaatctggatgaggagagc
tatgtggagaagttcaagccctacctaatggacgttgtgttggcctggtgcaacggctcc
agcttcttgaatgtctgcaaaatgacggacatctttgagggctccatcattcggtgcatg
cggcgtctggaggagctgttgcgtcagctctgccaggcatccaagacgattggcaacaca
gatctggagaacaagttctccgaaggcattcgactgctcaagcgcgacattgtctttgct
gcctcgctctatctatag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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