KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0291868
Entry
DDB_G0291868      CDS       T00245                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit
  KO
K10755  replication factor C subunit 2/4
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03030  DNA replication
ddi03410  Base excision repair
ddi03420  Nucleotide excision repair
ddi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DDB_G0291868 (rfc2)
   03410 Base excision repair
    DDB_G0291868 (rfc2)
   03420 Nucleotide excision repair
    DDB_G0291868 (rfc2)
   03430 Mismatch repair
    DDB_G0291868 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ddi03032]
    DDB_G0291868 (rfc2)
   03036 Chromosome and associated proteins [BR:ddi03036]
    DDB_G0291868 (rfc2)
   03400 DNA repair and recombination proteins [BR:ddi03400]
    DDB_G0291868 (rfc2)
DNA replication proteins [BR:ddi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    DDB_G0291868 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    DDB_G0291868 (rfc2)
Chromosome and associated proteins [BR:ddi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    DDB_G0291868 (rfc2)
DNA repair and recombination proteins [BR:ddi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     DDB_G0291868 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    DDB_G0291868 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_16 AAA_22 AAA_5 Rad17 Viral_helicase1 AAA_11 MCM nSTAND3 NTPase_1 AAA_18 AAA_24 AAA_19 Mg_chelatase AAA_assoc_2 AAA_2 RNA_helicase ATPase_2 AAA_3 IstB_IS21 AAA_28 RuvB_N AAA_30 AAA_7 bpMoxR
Other DBs
NCBI-GeneID: 8628373
NCBI-ProteinID: XP_629875
dictyBase: DDB_G0291868
UniProt: Q54E21
Position
6:850606..851622
AA seq 338 aa
MTTTTTTTTNTNTTNLDPLLPWVEKYRPILIKDIVGNEETVSRLESISKDGNLPNIIISG
PPGTGKTSSILCLARALLGANYKEAVYELNASDDRTLDVVRDKIKSFAMKKVTLPAGRHK
IIILDEVDSMTSGAQQALRRIMEIYSGTTRFAFACNQSTKIIEPIQSRCAVLRFTRLSDS
QILTRLREVVQIEKVPYTDDGLAAIIFTAEGDMRQALNNLQATHSGFGLINAENVTKVCD
QPHPLIIKQIIALCAKSDFKEAYPFLKKLWDDGYSSIDIISALFSITKSSNNIPEYQKLE
FLKEIGFCNLRATTGVNTLVQLTGLLSKLCLVSIKMKN
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgacaactacaactacaactacaacaaatacaaatacaacaaatttagatccattattg
ccatgggttgaaaaatatagaccaatattaattaaagatatagttggtaatgaagaaaca
gttagtagattagagagtatatcaaaggatggtaatttaccaaatattataattagtgga
ccaccaggtacaggtaaaacatcgagtatattatgtttagcaagggcattgttgggggca
aattataaagaggcagtatatgaattgaatgcatccgatgatagaacattggatgttgtt
agagataagattaaatcatttgcaatgaaaaaggtgacattgccagctgggagacataaa
atcattatattggacgaggtggatagtatgacaagcggagcgcaacaagcgttaagaaga
attatggagatatacagtggtacaacccgttttgcattcgcttgtaaccaatccaccaaa
atcattgaacctattcaatcaagatgtgctgtgcttcgtttcacacgtttatcagactca
caaattttaacacgtcttagagaagttgtacaaattgaaaaagtaccatataccgacgac
ggtttggctgctatcattttcacagcagagggtgatatgcgtcaagctttaaataactta
caagcaactcattctggttttggtttaatcaatgctgaaaatgttacaaaagtatgtgac
caaccacatccactcatcattaaacaaatcattgcattatgtgctaaatccgatttcaaa
gaagcttatccatttttaaaaaaactttgggatgatggttattcctcaatcgatatcatc
tctgccctctttagtattacaaaatcttcaaataatataccggaatatcaaaaattagaa
ttcttaaaagaaattggtttttgtaatttacgtgctacaactggtgtaaatactttagtt
caattaactggtttactttcaaaactttgtttagtttcaattaaaatgaaaaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   DICTYBASE (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (28)   
   Pfam (28)   
All databases (63)   

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