KEGG   Danaus plexippus (monarch butterfly): KGM_206827
Entry
KGM_206827        CDS       T04344                                 
Name
(GenBank) ATP-dependent RNA helicase DDX39A
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
dpl  Danaus plexippus (monarch butterfly)
Pathway
dpl03013  Nucleocytoplasmic transport
dpl03015  mRNA surveillance pathway
dpl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    KGM_206827
  09122 Translation
   03013 Nucleocytoplasmic transport
    KGM_206827
   03015 mRNA surveillance pathway
    KGM_206827
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpl03019]
    KGM_206827
   03041 Spliceosome [BR:dpl03041]
    KGM_206827
Enzymes [BR:dpl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     KGM_206827
Messenger RNA biogenesis [BR:dpl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     KGM_206827
Spliceosome [BR:dpl03041]
 Complex C
  Other components
   EJC/TREX
    KGM_206827
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    KGM_206827
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1
Other DBs
NCBI-ProteinID: OWR54828
UniProt: A0A212FM47
Position
Unknown
AA seq 425 aa
MADNDDLLDYEDEEQADQQNVDGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNHVYVLVMCHT
RELAFQISKEYERFSKYMAGVRVSVFFGGMPIQKDEDVLKTACPHIVVGTPGRILALVNN
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKDIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPDEIELST
YIEGR
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggctgataacgacgatcttctcgactatgaagatgaagagcaggcagatcaacagaac
gttgacggagcgaccgaagcggcgccaaaaaaggaggttaagggttcctacgtatcgatt
cacagctctggctttagggactttctccttaagcctgagattctacgagccatagtggac
tgtggtttcgaacatccatcagaagttcaacatgaatgtattcctcaagcggtactgggt
atggatatcttatgccaagctaagtccggtatgggcaaaaccgcggtgtttgtactagcc
acgttacagcaactagagccttcggataatcatgtttatgttcttgtcatgtgccacacc
cgagaattagcttttcaaatcagcaaagagtatgaacgcttttctaagtacatggccggc
gtccgtgtgtcagttttctttggcggcatgccgattcaaaaagatgaggatgttttaaaa
actgcatgccctcatatcgtcgttgggacaccaggacgtattttagccctcgttaacaat
aagaaattaaacttgaaacatctaaaacatttcatacttgatgaatgcgacaagatgttg
gaatctctggatatgagaagagatgtgcaagaaatattccgaaacactcctcatgggaaa
caagtgatgatgttttctgccactttgagtaaagatatcagacccgtatgtaagaaattc
atgcaggaccccatggaagtgtatgttgatgatgaagcaaaacttactctgcatggactt
cagcagcactatgtgaaacttaaagaaaatgagaagaataagaagttatttgaactctta
gatgtgttggaattcaaccaagtagttatatttgtaaaatcggttcaaagatgcatagct
ctagcacaacttttgacggaccaaaacttccctgccattggaattcatagaaacatgaca
caagacgagcgtctttcccgttaccaacagttcaaagatttccaaaagagaatattggta
gcaaccaatctgtttggaagagggatggatattgaaagagttaatatagtatttaattat
gacatgcctgaagactctgatacctacctccatagagtggcccgagcaggaagattcggt
accaaaggtctagccataacaatggtatcggatgaaaatgatgcaaaaatcctgaacgaa
gtccaggaccgttttgatgtcaacataacagagctacctgatgagattgagctatccact
tacatagagggacgataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (76)   
   KEGG ORTHOLOGY (1)   
   RefGene (73)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (89)   

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