KEGG   Danio rerio (zebrafish): 100333601
Entry
100333601         CDS       T01004                                 
Symbol
mmp25b
Name
(RefSeq) matrix metalloproteinase-25
  KO
K08003  matrix metalloproteinase-25 (membrane-inserted) [EC:3.4.24.-]
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:dre01002]
    100333601 (mmp25b)
Peptidases and inhibitors [BR:dre01002]
 Metallo peptidases
  Family M10
   100333601 (mmp25b)
SSDB
Motif
Pfam: Peptidase_M10 Hemopexin PG_binding_1 Astacin Peptidase_M66 Reprolysin_4 DUF5928 Reprolysin_3 Reprolysin_5 IN_DBD_C Metallopep DUF4953
Other DBs
NCBI-GeneID: 100333601
NCBI-ProteinID: XP_002663942
ZFIN: ZDB-GENE-100308-4
Ensembl: ENSDARG00000010556
UniProt: E7F1N5
Position
12:4260714..4279423
AA seq 573 aa
MSFSGYLGLVYLTCPMLVFFSAVHSAPVKDQYSRGVDWLSRYGYLPPLDPRTGQLQSKDG
IERAIREMQRFAGLKETGKLDSDTLTLMNTPRCSLPDIIGIEDKLKKRRRKRYATTGLRW
TKSDITWSVQNYPSVHKRLTPTQVDPIISYALKAWSDVTNLNFYGASSSEKDRADIRISF
ARSLHDDGYPFDGKGGTLAHAFFPGESDVAGDTHFDDDEIWTYLDESGTDLFAVAVHEFG
HALGLSHSSSSPSIMKPYYQGSVGDVGSYILPDDDREAIQSLYGRKISSPTPSPNKPTSH
LPKPPATYPKGPVKPDPSIQNRCEGGFDAVANLRGEVFFFKGPYFWRIQRTGSLVSFQPA
HIKNFWMGLPPTTNKVDAVYERKVDNAIIFFIGSQYWVFKNTEVLPGYPRPLSDWGMITQ
DGRKVMRVDAAFIWAHNGKTYIFSGGEFWRFSEGRETELRGPDTGYPRNTNLWKGAPSNP
DDVITWGQGDAYFFKDNSYWVLKNGEMDQTSVTKKSTAVDWMMCQQETTKAPESPRRREG
VNCYCDNSAGLQMSVSAWLLLITALLHIGFNSQ
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgagtttctcaggatatcttggtctggtttacctgacctgccctatgcttgtgttcttc
tctgcggttcattcggctccggtaaaggatcagtattctcggggtgtggactggttgagc
cggtatggatatctgcctcctctagacccgcgcacaggacagctacagagcaaagacggc
atcgagagagccattagagaaatgcagagattcgctggactcaaggaaacaggcaaactc
gacagtgacactctgacgctgatgaacacaccacgatgttctctgccagacatcataggc
attgaggacaagctgaaaaagcgcagaaggaaaagatacgcaaccactgggctccgctgg
acaaagtctgacattacatggagtgtccagaactacccgtctgtccataaaagactgaca
cccactcaagtcgaccctataatatcctatgccctgaaagcctggagtgacgtcaccaac
ctcaatttctatggagcgtcctccagcgagaaggacagagctgatatccggatctctttc
gcccgctcgctccatgatgatggctatccatttgatgggaagggagggactctcgctcat
gccttcttccctggggagtcggatgttgctggagacacacatttcgacgatgatgagatt
tggacatacctagatgaaagcggcactgatttgtttgcggttgcggtgcatgagtttggt
catgctctgggtctttctcactcctcctcttccccctccatcatgaagccctattatcag
ggctctgttggagatgtaggatcctacattcttccggacgatgaccgtgaggccattcag
tcactctacggaagaaagattagctcgccgacaccttcccctaataaacctacatcacac
ctacccaaaccacctgcaacatatccgaaaggtccagtaaaacctgatccgtcaatccag
aatcgctgtgagggaggttttgatgcagtggcgaacctcagaggagaagttttctttttt
aaaggtccatatttctggcgaatccagcggacgggttctctagtgtcctttcagcctgct
cacattaagaacttctggatgggtcttcctccaaccaccaataaggtagatgcagtctat
gaaagaaaggtggacaacgcaatcatcttcttcataggctcacagtactgggtatttaaa
aacacggaggtgcttcctggctatccacgtccattgtctgactggggaatgatcactcaa
gatggaaggaaggtgatgagagtggatgcagcctttatttgggctcataatggaaaaacc
tacattttcagcggtggagagttctggaggttctctgaaggcagggagactgagctgcgc
ggtccggacacaggctatcccagaaacaccaacctctggaagggggcgccaagtaacccg
gatgacgtcatcacctggggacaaggagacgcctatttcttcaaggacaattcatactgg
gtgctgaagaatggagaaatggaccagaccagtgtcactaagaaatcaaccgcagtggac
tggatgatgtgtcagcaagagacaaccaaagctccagaaagcccacggcggagagaagga
gtgaactgctactgtgacaacagcgcgggcctgcagatgagtgtttcagcctggctactg
ctcatcacagcactgcttcatattggcttcaactcgcaataa

  All links  
Gene (16)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (33)   

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