KEGG   Enterococcus avium: EH197_02390
Entry
EH197_02390       CDS       T05982                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
eav  Enterococcus avium
Pathway
eav03420  Nucleotide excision repair
eav03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:eav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EH197_02390
   03430 Mismatch repair
    EH197_02390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eav03400]
    EH197_02390
Enzymes [BR:eav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EH197_02390
DNA repair and recombination proteins [BR:eav03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EH197_02390
   MMR (mismatch excision repair)
    Other MMR factors
     EH197_02390
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C_2 DEAD Viral_helicase1 AAA_16 AAA_11 SLFN-g3_helicase ResIII AAA_30 PhoH zf-C2H2_aberr nSTAND3 NACHT Flg_hook Mg_chelatase CdiI_2 Stu2_CTS
Other DBs
NCBI-ProteinID: QCQ11085
UniProt: A0A4P8K8Z4
Position
complement(384359..386344)
AA seq 661 aa
MDTTTEKNYLAEVTHQLKQKITEVEAALNTNEDNYKELKHYTIDYKNELDKYEVYNHQQN
LKFLDSRSVLEANVLKKLNYQKQTPYFSKIAFQFDDEEEVEDFYIGRYGFADRYGEQLIY
DWRAPISSLYYDFSLGEAYYESHQRKFYGQLRLKRQFEIKNGAISFVVDTNDAINDELLM
RELGKSTSNEMKTIIHTIQKEQNQAIRDTKTKNLIIQGVAGSGKTSIALHRMAYLLYQKK
EELDASDILIVSPNQVFADYIATVLPELGEEELPQIDIVKLGTMFIEEKYQVSDRHDELK
AALENPNSKQAENYRYKQSREFYELLQTHLEQLKARLYSAEIKIDNYHISAAEIKRFVDQ
QSEKSLVELIQEITKLLSERVSEIGRKSFAKTLEQLFKKRLNTIGSLSDYYQFLATNHLE
HASEKNRINYSDLFPYLFFKLMIAGIKPNKQIQHLVIDEMQDYSLLQLATLERLFPCPKT
ICGDIHQSLIASDSNFLAEVQKNLPQSRLLKFQTSYRSSFEIMNFAKRFIDEEEIQPVQR
HGKEVEVLEYSKNMLAQKLADFKASTFKSCGIICQNWQEVERLEADFPDEQLIRFEKNTK
KIAEGIIVTTTQFAKGLEFDQVILPDIRSSQLTQKSTLLYTSCSRALHELTLLINDGKDF
Q
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggacacgactactgaaaagaactatttagcagaagtgacgcaccagcttaaacaaaaa
atcacagaggttgaggctgccctgaacaccaatgaagacaattataaagagttgaagcat
tatacaattgattacaaaaatgagctagataaatatgaggtttataatcaccagcaaaat
ttaaaatttcttgatagccgaagtgttttagaggcaaatgtattaaagaaactgaactat
caaaagcaaactccttacttcagtaaaattgcatttcaatttgacgatgaagaggaggta
gaggacttttacattggtcgatatggatttgcggatcgctatggagaacagctgatctat
gattggcgggcaccaatttcttcgctttattatgatttttcgcttggtgaggcctattac
gaatcccatcaacgcaaattttacggtcaattacgtttgaaacgacaatttgaaattaaa
aatggcgcgatcagctttgtagtagatacaaatgatgccatcaatgatgagcttctgatg
cgagagctggggaagagtacctccaatgaaatgaaaaccatcattcacacgattcaaaag
gaacagaatcaggcgatcagagacacgaaaaccaaaaatttgattattcaaggggtagcc
ggatcagggaaaacttctatcgcgcttcatcggatggcctatttgctttatcagaaaaaa
gaggagctggatgcttccgacattctgattgtctctcctaatcaagtatttgcggattac
atcgcaacggttttgccagaattaggtgaagaagagctgccgcaaattgacattgtcaaa
ttaggcacgatgtttattgaagaaaaatatcaggtgtccgatcgccacgacgaattgaag
gcagcactagaaaatcccaattccaaacaggctgaaaactacagatataagcagtctagg
gaattctacgagttgcttcaaacgcatcttgaacaattgaaggcacgactgtattcagca
gaaatcaagattgacaattatcatatttcagcagcagaaatcaaacgcttcgtcgatcag
cagtcagaaaagagtctcgtcgaactgattcaagaaattacgaagcttttaagcgaacgt
gtttcagaaataggtcgtaaatcctttgccaaaacgctcgaacagcttttcaagaaacgt
ctcaatactatcggaagtttgtcggattattatcaatttctagccacgaatcacttggag
catgcgtctgaaaaaaatcgaatcaattattcggatctatttccctatttattcttcaaa
ttaatgattgccgggattaagccgaacaaacagattcagcatttagtaattgatgagatg
caggattactccttgctgcagttagcgacgctcgagcgcctgtttccatgcccgaaaacc
atttgcggagacattcatcagtcgttgatcgcaagtgattcaaattttctagcagaagtt
caaaaaaatctgccacaatcacgattattgaagtttcagactagttatcgctctagcttt
gagatcatgaatttcgccaaacgttttattgacgaggaggagattcagccggtacagcgt
cacggcaaggaagttgaagtgcttgagtatagtaagaacatgctcgcgcaaaagctggcc
gattttaaagcaagtacgttcaaatcttgtggtataatttgtcagaactggcaggaagta
gaaaggcttgaggccgattttcccgacgaacagctgattcgctttgaaaaaaatacaaaa
aagattgcggaaggcattatcgtaaccactacacaatttgccaaagggttggaatttgat
caggttattttgccggatatccgttcgagtcaactgacacaaaaaagtacactgctttac
accagctgttcgagagctctgcatgagctaacgcttttaataaatgatggaaaggatttt
caatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (28)   

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