KEGG   Escherichia coli O18 K1 H7 UTI89 (UPEC): UTI89_C3590
Entry
UTI89_C3590       CDS       T00338                                 
Symbol
deaD
Name
(GenBank) Cold-shock DEAD-box protein A
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
eci  Escherichia coli O18:K1:H7 UTI89 (UPEC)
Pathway
eci03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eci00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UTI89_C3590 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eci03019]
    UTI89_C3590 (deaD)
   03009 Ribosome biogenesis [BR:eci03009]
    UTI89_C3590 (deaD)
Enzymes [BR:eci01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     UTI89_C3590 (deaD)
Messenger RNA biogenesis [BR:eci03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     UTI89_C3590 (deaD)
Ribosome biogenesis [BR:eci03009]
 Prokaryotic type
  rRNA helicases
   UTI89_C3590 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA DeaD_C ResIII CMS1 AAA_22 DRTGG
Other DBs
NCBI-ProteinID: ABE09036
UniProt: Q1R6H8
Position
complement(3525806..3527761)
AA seq 651 aa
MLINFMMSYVDWPPLILRHTYYMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIP
HLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFS
KHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEA
DEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRP
DISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGD
MNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGR
AGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESS
DLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDR
GPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRY
IGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGF
GGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRGRFGGDA
NT seq 1956 nt   +upstreamnt  +downstreamnt
ttgctgatcaatttcatgatgagttatgtagactggccgccattaattttgaggcacacg
tactacatggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatcctt
gaagcccttaacgatctgggttacgaaaaaccatctccaattcaggcagagtgtattcca
catctgctgaatggccgcgacgttctgggtatggcccagacggggagcggaaaaactgca
gcattctctttacctctgctgcagaatcttgatcctgagctgaaagcaccacagattctg
gtgttggcaccgacccgcgaactggcggtacaggttgctgaggcaatgacggatttctct
aaacacatgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcaa
ttacgcgccctgcgtcaggggccgcagattgttgtcggtactccgggccgtctgctggac
cacctgaaacgtggcactctggacctctctaaattgagcggtctggttctggatgaagct
gacgaaatgctgcgcatgggcttcatcgaagacgttgaaaccattatggcgcagatcccg
gaaggtcatcagaccgctctgttctctgcaaccatgccggaagcgattcgtcgcattacc
cgccgctttatgaaagagccgcaggaagtgcgcattcagtccagcgtgactacccgtcct
gacatcagccagagctactggactgtctggggtatgcgtaaaaacgaagcactggtacgt
ttcctggaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgact
ctggaagtggcagaagctcttgagcgtaacggctacaacagcgccgcgctgaacggtgac
atgaaccaggcgctgcgtgagcagacactggaacgcctgaaagatggtcgtctggacatc
ctgattgcgaccgacgttgcagcccgtggcctggacgttgagcgtatcagcctggtggtt
aactacgatatcccgatggattctgagtcttacgttcaccgtatcggtcgtaccggtcgt
gcaggtcgtgctggtcgtgcactgctgttcgttgagaaccgtgagcgtcgtctgctgcgc
aacatcgaacgcaccatgaagctgaccattccggaagtagaactgccgaacgcagaactg
ctgggcaaacgtcgtctggaaaaatttgccgctaaagtacagcagcagctggaaagcagc
gatctggatcaataccgtgcactgctgagcaaaattcagccgactgccgaaggtgaagag
ctggatctcgaaactctggcagccgcactactgaaaatggcacagggtgaacgtactctg
attgttccgccagatgcgccgatgcgtccgaaacgtgaattccgtgaccgtgatgaccgt
ggtccgcgcgatcgtaacgaccgtggcccgcgtggcgaccgtgaagatcgtccgcgtcgt
gaacgtcgtgatgttggcgatatgcagctgtaccgtattgaagtgggccgcgatgatggt
gttgaagttcgtcatatcgttggcgcgattgctaacgaaggtgacatcagcagccgttac
atcggtaacatcaagctgtttgcttctcactccaccatcgaactgccgaaaggtatgccg
ggtgaagtgctgcaacactttacgcgtactcgcattctcaacaagccgatgaacatgcag
ttgctgggcgatgcacagccgcatactggtggtgagcgtcgtggcggtggtcgtggtttc
ggtggcgaacgtcgtgaaggcggtcgtaacttcagcggtgaacgccgtgaagggggtcgt
ggtgatgggcgtcgttttagcggcgaacgtcgtgaaggccgcgcaccgcgtcgtgatgac
tctaccggtcgtggtcgtttcggtggtgatgcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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