KEGG   Escherichia coli DH1: EcDH1_3495
Entry
EcDH1_3495        CDS       T01996                                 
Name
(GenBank) type II secretion system protein E
  KO
K02504  protein transport protein HofB
Organism
edh  Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:edh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:edh02044]
    EcDH1_3495
Secretion system [BR:edh02044]
 Type II secretion system
  Type IVa pilus homolog protein
   EcDH1_3495
SSDB
Motif
Pfam: T2SSE MshEN AAA_16 AAA_22 AAA_7 AAA_30 AAA_14 ResIII AAA_11 AAA_29 nSTAND3 DEAD AAA Sigma54_activ_2 AAA_19 AAA_23 PhoH SLFN-g3_helicase
Other DBs
NCBI-ProteinID: ACX41110
Position
3754278..3755663
AA seq 461 aa
MNIPQLTALCLRYHGVLLDASEEVVHVAVVDAPSHELLDALHFATTKRIEITCWTRQQME
GHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLH
PLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELAGNAVSFRIATLPCRGGEKV
VLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQKLN
TADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAE
IAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRR
QQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVES
LETHARQAGMRTLFENGCLAVEQGLTTFEELIRVLGMPHGE
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgaatattccacagctcactgccctgtgtctgcgttatcatggagtcttgctggatgcc
agcgaagaggtggttcatgttgcggtagtcgatgcaccttcgcatgagctactggacgca
ttgcatttcgctaccaccaaacgtattgagatcacctgctggacgcgccaacaaatggaa
ggtcacgccagtcgcacacaacagacattgcccgtagctgttcaggagaagcatcagccc
aaagcagagttgctaactcgaacgttacaatctgcgctggaacaacgcgcgtctgatatt
catatcgaaccagcggacaatgcctaccgcatccgcttgcgtatcgacggcgtattgcat
cctttaccggatgtttcaccggatgccggagtcgcattaaccgccagattaaaagtgctg
ggaaacctggatattgcggaacatcgcctgccgcaggacgggcaattcactgtcgaactg
gcaggaaacgccgtctcatttcgtattgcgaccttaccatgtcggggtggtgaaaaggtg
gtattaaggttgttacagcaggtgggtcaggcactggatgtcaacacgcttggaatgcag
ccgttacaactggcggactttgctcatgccttgcaacaaccacagggactggtgctggta
actggccctaccggcagcggcaaaacggtcacgctttatagtgccctgcaaaagctgaat
accgctgacattaatatttgtagcgtcgaagatccagttgagatccccatagccggacta
aaccagacgcaaatccatccgcgtgccggactcacctttcagggcgttttgcgtgcgtta
ttgcgccaggatcctgacgtcatcatgatcggagagatccgcgatggcgaaacagcagag
atcgctattaaagcggcgcaaactggtcacctggtgttgtctaccctacacactaattcc
acctgcgaaacgctggtacgtttacagcaaatgggggtcgcccgctggatgctatcatcg
gcgcttacgctggtaatagcccagcgtctggtacgcaaactttgcccacattgtcgccgg
cagcaaggggagcccatccacattccagacaatgtatggccatcgccgctgccccactgg
caggcacccggttgtgtacattgctaccacggtttttatggtcgtacggccttatttgaa
gttctgcccataacgccggtcattcgtcagcttatttccgctaataccgacgttgaatcg
ctggaaacgcacgcacgacaggcgggtatgcgtacgctttttgaaaacggctgcctggcc
gtagagcaaggcttaaccacctttgaagagttaatccgcgtactggggatgccgcatggc
gagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (24)   

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