KEGG   Edwardsiella ictaluri: NT01EI_0336
Entry
NT01EI_0336       CDS       T00912                                 
Name
(GenBank) hypothetical protein
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
eic  Edwardsiella ictaluri
Brite
KEGG Orthology (KO) [BR:eic00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:eic02044]
    NT01EI_0336
Secretion system [BR:eic02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   NT01EI_0336
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind T4SS-DNA_transf DUF87 nSTAND3 AAA_22 CobU
Other DBs
NCBI-ProteinID: ACR67578
UniProt: C5BCX2
Position
338708..340561
AA seq 617 aa
MSAGQIPVSGQRLFLGRGFRWTQKHTQRLQDTLRPEVAKYLQPGRLYLAARWLEMKTEHS
APGLGKLLRTDSPLNPVRPLPPVGGNPVLHGIEPDEQDVWLALLERVGHTIVYGTTRVGK
TRLAELLVTQDIRRGEVTIVFDPKGDADLMKRVWAEAHRADRGDALYIFHLGWPEISARY
NAVGRFGRVSEVASRVAGQLSGEGNSAAFREFAWRFVNIIARALVALGERPDYTLIMRYV
NNIADLYIRYAEKVIREQLPSLQAQIQNNEQVLGDDDVPRNMQGQPDAVRIWSIEVALSS
EEGKQLYDPILDGLRSAVRYDRTYFDKIVASLLPLLEKLTTGKTAELLAPDYLEMSDSRP
IFDWEQIIRKKAVVYIGLDALSDSEVASAVGNSMFADLVSVAGHIYKHGIHAGLPGEGES
KVPVNLHCDEFNELMGDEFIPLINKGGGAGMQVTAYTQTSSDIEARIGNAAKTAQVQGNF
NNLIMLRVRENRTAELLTTQLPQVEIYTKTLVSGHQDTDISAGQDFTSSTQDRVGTVKVP
LLEPADVVTLPKGQAFALLEGGQLWKIRMPLPADDADDTLMPQSIAKIAEEMRRNYHSGE
AWWNDAPGIVPAGGVRG
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgagcgccgggcagataccggtcagtggtcagcgcctgtttttggggcgcgggtttcgc
tggacacaaaaacatacccagcgactgcaggatacgctgcgcccggaagtggcgaagtac
ctgcagccgggtcggctatatctggccgctcgctggctggaaatgaagacggagcattca
gcgccgggtctgggaaaactgctgcgcacggattcgcccctgaacccggttcgcccgctg
ccgccggttggtggtaatccggtgctgcacggcatagagccggatgagcaggatgtctgg
ctggcgttgctggagcgtgtcgggcataccatcgtctatggcaccacccgtgtgggaaaa
acacgcctggcggagctgctggttacccaggatattcgtcgcggtgaagtcaccattgtt
tttgatccgaagggcgatgccgatctgatgaagcgcgtctgggctgaagcacaccgtgcc
gacaggggggatgcgctgtatattttccatctgggctggcctgaaatctccgcccgctat
aacgctgtcggacgttttggccgggtgtcagaagtggcgtcccgcgtggcgggccaactg
tcgggggaggggaacagcgcggcgttccgtgagtttgcctggcggtttgtcaacattatc
gcccgggccctggtagcactgggtgagcgtccggattacacgctgattatgcggtatgtg
aacaatatcgccgatctgtatatccgttatgcagagaaggttatccgtgagcagcttccc
tcactgcaggcacaaattcagaataacgagcaggttctgggggatgacgatgttccacgg
aatatgcaggggcagccggatgcggtgcgcatatggtccatagaggtggcgctcagctcg
gaagagggaaagcagctgtatgatcccattctggatggtctgcgtagcgcagtacgctat
gaccgtacctattttgataaaattgtggcctccctgctgcctctgctggagaaactgaca
accgggaaaaccgcagagttgctggcgccggattatctggagatgagcgattcacggccg
atttttgactgggagcagataatccgcaaaaaggcagtggtgtatattggccttgatgca
ctcagcgacagtgaagtggccagcgccgtggggaattccatgttcgccgatctggtgagc
gtggccggtcatatctacaagcatggtattcatgccggactgccgggagagggtgagagc
aaggttccggttaacctgcattgtgatgaatttaatgagttgatgggtgatgaatttatc
ccgcttattaacaaagggggcggcgccggtatgcaggtaaccgcttatacccagacctca
tcggatattgaggcccggatcggtaatgcggccaaaacggctcaggtccagggcaacttc
aacaatctgattatgttacgtgtcagggagaaccgtaccgctgagctcctgactacgcaa
ttgccgcaggtagagatttacaccaagacgctggtctctggccatcaggataccgatatc
agtgcgggtcaggattttacctccagtacgcaggatcgtgtcgggacggtcaaagtaccg
ttgctagagccggctgatgtggtaacactaccgaaagggcaggcgttcgccctgctggaa
ggcgggcaactgtggaaaatccgtatgccgctgcctgccgacgatgcggatgatacactg
atgccgcagagcattgcgaaaattgccgaggaaatgcgccgcaattaccacagtggtgag
gcgtggtggaatgatgcgccgggcatcgtgcctgcaggaggtgtgcgtggctga

  All links  
Gene (9)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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