KEGG   Echinicola strongylocentroti: DN752_22080
Entry
DN752_22080       CDS       T05506                                 
Name
(GenBank) ATP-dependent helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
est  Echinicola strongylocentroti
Pathway
est03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:est00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DN752_22080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:est03019]
    DN752_22080
   03009 Ribosome biogenesis [BR:est03009]
    DN752_22080
Enzymes [BR:est01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DN752_22080
Messenger RNA biogenesis [BR:est03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DN752_22080
Ribosome biogenesis [BR:est03009]
 Prokaryotic type
  rRNA helicases
   DN752_22080
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 Mnd1
Other DBs
NCBI-ProteinID: AWW32618
UniProt: A0A2Z4IPP3
Position
complement(5555471..5557165)
AA seq 564 aa
MENEILFADLGISAEILQAVEGMGYTQPSEIQAQSIPLMLDGRDVIGQAQTGTGKTASFG
IPIVDRVDNTSKQPQALILCPTRELAVQVEGEITKLAKHKKGVFSTAIYGGEAIDRQIRT
LRKGVQIVVGTPGRIMDHMNRGTLKLDSVKTIVLDEADEMLDMGFREDIETVLSQMPEDR
QTIFFSATMAKPIMDLTKKYQINPEIVKITRKELTVENISQVYYEVKPPLKMELITRLIN
VHQFNLGVVFCNTKRATDEVTEGLIARGITAEALHGDLSQAQRDKVMNKFRKGLCTVLVA
TDVAARGIDVDNVEVVFNYDLPLDEEYYVHRIGRTGRAGRSGMAISFITGRKDIFRLKDL
EKYIKTSLTKMNPPSVAEMIDQKKDQLGKEVTTELSKEEDNQVFEAALGQLLAEGLTMDQ
IALGLVKLQMGKSIQELSDMNFDLNLGKDRDRGGRGKDRFERGRKGRGADRPGGRKGGRE
KGRREANMSRLFLNLGKKDRIRPNDIVGAIAGEAGISGRQIGGIDIFDNFSFVDVPTKDA
SHVINVMKRNTIKGKPVNMELSKD
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggaaaacgaaattttattcgcagacctgggaatttcagctgaaattcttcaggcagtg
gaaggcatgggctatacccaaccttcagaaattcaagcacaatcaatcccattaatgcta
gatggccgcgatgtcatcggtcaagcacaaacaggaacagggaaaaccgcttcctttggg
attcccattgtagatcgtgtagacaacacgagcaaacagcctcaagcattgatcctatgt
cctacaagggaattggccgttcaggtcgaaggagaaatcaccaaacttgcaaagcacaaa
aaaggtgtattcagcacggccatctacggtggtgaagccattgatcgtcagatcagaacc
cttagaaaaggcgttcagatcgtagtcggtacacctggtagaatcatggaccacatgaat
cgtggcaccctgaaattggactcagtgaaaactatcgtcttggatgaagctgacgaaatg
ctcgacatgggctttagagaagacatcgaaacggttctaagccaaatgcccgaggatcgt
caaaccatcttcttctctgctaccatggccaagcctatcatggacctgaccaaaaagtat
cagataaatcctgaaattgtcaaaataacacgtaaggagctgacagtagagaatatatcg
caggtttattacgaagtgaagccaccattgaagatggaattgatcacgaggttgatcaat
gttcaccagtttaaccttggcgtagttttctgtaacaccaaaagagctaccgatgaggta
accgaaggcttgatcgcccgaggaattacagctgaagcacttcacggtgacctttcacag
gcacaacgtgacaaggtaatgaacaaattccgtaaaggactttgtaccgtattggtagcg
accgacgtggcagcacggggtattgatgtagataatgtagaagtagtgttcaactacgac
ctcccactcgatgaggaatattacgttcaccgaatagggagaacaggaagagcaggtcgt
tctggaatggccatttcctttatcacaggaagaaaagacatattcaggctaaaagacctt
gaaaagtacatcaagacttccttgaccaaaatgaacccgccatctgtagcggagatgatc
gaccaaaagaaagatcaacttggaaaagaggtgactacggagctgtccaaagaagaagat
aaccaagtcttcgaagcagctttggggcaattacttgccgaaggattgaccatggaccaa
atagcacttggcttggtcaagcttcaaatgggcaaatccatccaggaactttcggatatg
aactttgaccttaacttgggcaaagacagagacagaggaggaagaggtaaagaccggttc
gaaagaggaagaaaaggccgtggcgcagaccgtccaggaggcagaaaaggtggtagagaa
aaaggacgacgtgaagccaatatgtctcgacttttccttaatcttggcaaaaaagacagg
atccgtccaaatgatatcgttggtgccatagctggtgaagcgggtatttctggtcgtcag
atcggtggtattgatatctttgacaacttctcttttgtagatgtaccgacaaaggatgcc
agtcacgtaatcaatgtaatgaagagaaacaccatcaaaggcaaacctgtcaacatggaa
ctttctaaagattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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