KEGG   Empidonax traillii (willow flycatcher): 114060063
Entry
114060063         CDS       T05887                                 
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
  KO
K13026  ATP-dependent RNA helicase DHX57 [EC:5.6.2.6]
Organism
etl  Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:etl00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    114060063 (DHX57)
Enzymes [BR:etl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     114060063 (DHX57)
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C RWD DEAD HA2_C zf-CCCH_4 HA2_N Torus zf-CCCH zf_CCCH_4 nSTAND3 zf-CCCH_2 AAA_22 UBA AAA_19 T2SSE NB-ARC AAA_14 Viral_helicase1
Other DBs
NCBI-GeneID: 114060063
NCBI-ProteinID: XP_027745036
Position
Unknown
AA seq 1369 aa
MSSAGRKRGKPNRGGGRGRGGGGRGGSGRGGGSSGRSNKPQLGGNRKCSAKIWDDGDDFC
LFEEPRLESRSSAPARRGGQMKQRPEARMPLQTIHMTSENQRRVKELLQELQGQELAPES
DVAGEDDDEPDYLDDEQCWSTEQELSEVIPRLSAEPAEHRIVENEVSPFAVHKLSRYGFD
CERCRTVLRSCNGNIGASLEYLLLQCFTERYGEKMQVSAAAAEASQEECLEQRQEEAFAL
RSIYGEKFVERIKNHVWTFSLELEYLADRLSKSKQKAGCTRDTAKQTSKEICKFYLQGGC
RFGSKCRFAHEFPPNHPLKPSKNSVDDAHLRHNDGPIYELEVRFPEGNKYPLQAPLVAFY
STDENLPLACRLHIAEFLFGKALVAAESHEPVVYTLVTCLEDEHEISELLGNTQHKYSVP
LVSLLATPPVKLQTESTPGLNQLSEASTVSEPQEEEAVAEEEEEEEEEPEQVVMENESYV
NLKKKLSKKYDVQAKSLYNENVKLCARFRQRKSSRHFQSMLYERQKLPAWQERENILDLL
KSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPGGVANIICTQPRRISAISVAERVAKER
TERIGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQGITHVIVDEVHERTEES
DFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFFLEDVIA
MTRYVLEDCSPYRRKAKQENKQNGRHKRTAFEEVEEDLRRAGLLEGTDTVVRDSDPDQKL
TLKQLLTRYKGVNKAVLKTMSLMDLDKVNLELIEALLEWIVAGRHSYPPGAVLIFLPGLA
EIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVTKIIISTNIAET
SVTIDDVVYVIDSGKMKEKRYDPGKGMESLEDTFVSKANALQRKGRAGRVASGVCFHLFS
SHHYNHQLVKQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSRLIEPPRTESLQASKV
RLQALGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFV
SPWDKREEANKKKLEFAVGNSDYLALLQAYKGWRLSIEEGSQASYNYCRENFLSGRVLQE
IASLKRQFAELLSDIGFVKEGLKARDIEKKWSQGGDGVLDATGEEANSNAENIKLISAML
CAALYPNVVQVKKPEGKYQKTSTGAVKMQPKAEELKFVTKNDGYVHIHPSSVNYQTRHFE
SPYLVYHEKIKTSRVFIRDCSMVSVYPLVLLGGGQVHMQLQKGEFVISLDDGWIRFVAAS
HQVAELVKELRCELDQLLQDKIKNPSMDLCMCPRGSRIIGMIVKLVTTQ
NT seq 4110 nt   +upstreamnt  +downstreamnt
atgagttcagccggaaggaaaagaggaaagcccaacagaggaggaggaagagggagagga
ggaggaggaagaggaggcagtggaagaggaggaggcagcagtggtcgttcaaacaagcct
cagcttggtgggaataggaaatgttcagccaaaatttgggacgatggagatgatttttgt
ctcttcgaggaaccaaggctagaatccagatcaagtgcccctgccagaagaggagggcaa
atgaaacagagacctgaagcaagaatgcctctgcaaaccatacacatgacatcagagaat
cagagaagagtgaaagaacttcttcaagagcttcaagggcaggagctggctcccgaatca
gatgtagctggtgaagatgatgatgaacctgattaccttgatgatgaacagtgctggtca
acagaacaggaactttctgaagtgataccgaggttgtctgctgagccagctgagcacaga
attgtagaaaatgaagtgtctccatttgctgtgcacaaactctccaggtatggttttgac
tgtgagcgttgtaggacagtgctgagatcctgcaatggtaatattggggcatcgttagag
tatttgctattgcagtgctttaccgaaagatatggagagaagatgcaggtttctgcagca
gctgctgaagccagtcaagaagaatgtttagaacagagacaagaagaagcttttgccctc
cggtcaatctatggagaaaaatttgtagaaagaattaaaaatcacgtttggacttttagt
ttggaactggagtacctagcagacagactcagcaaatctaagcaaaaggctggttgtact
agggacacagcaaaacagacttcaaaggaaatatgtaaattttatctccaaggaggctgc
aggtttggttcaaaatgcagatttgcacatgaattccctccaaaccatccactaaaacca
tccaagaactctgtagacgatgctcatctcagacataatgatggtcccatatatgaactt
gaagtaagatttcctgaaggaaacaaatacccacttcaagcacctcttgtggcattttat
tccactgatgagaatctgcctcttgcttgtcgtttacacattgctgaattcctcttcgga
aaggccttggtagctgcagagtctcatgaaccagttgtatataccttagtgacttgctta
gaagatgaacatgaaataagtgagttacttggcaatactcagcacaagtacagtgttcct
cttgtgtccctactggcaacacctcctgtaaagctacagacagagagtacacctggttta
aatcaactgtctgaagcttcaacagtgtcagagcctcaagaagaagaggcagtggcagaa
gaggaggaggaggaggaggaagagcctgaacaggttgttatggagaatgagagttacgtg
aacctcaagaaaaagctttccaaaaagtatgatgtgcaggcgaagtctctgtataacgaa
aatgttaaactctgcgcgcggtttcggcagagaaagtcttctaggcacttccagtccatg
ctgtatgaaagacagaagctccctgcatggcaagagagagaaaacattctggatttgctg
aagagccaccaagttcttgttgtgagtggcatgacaggatgtggcaaaaccactcagatt
cctcagttcattttggatgcttcgttgcaaggatctccaggcggagttgcaaacatcatc
tgcactcagcctcgcaggatctctgccatttctgtggctgaacgtgtagccaaagaaaga
acagaaaggattggactcactgttggatatcagatccgtctagaaagtgtaaagtcctca
gctaccagactcttgtactgcactactggtgtgctgctgagaaggctggaaggagatctg
actttgcagggaatcacacatgttattgttgatgaagttcacgaaagaacagaagaaagt
gacttcttgctgctggttttgaaggatataatggttcagaggccagacctgcgcattata
cttatgagcgccaccctgaatgcagagcttttttctcaatactttcactcttgtccaatt
attaacataccaggtcgaacatttcctgtggaccagttttttctggaggatgtgattgca
atgacaaggtatgttttagaggactgcagtccctacaggcggaaggcaaagcaagaaaac
aaacagaatgggagacacaaaagaactgcatttgaagaagtagaggaggacctgagacgt
gctggccttctggaaggcacagacaccgtggtcagagattcagacccagaccaaaaatta
actctgaagcaactccttacacgatataaaggggttaacaaggcagtgttgaaaacaatg
tctctcatggacttggacaaagttaatctggaattaattgaagccttgctggaatggata
gttgctggcagacattcatacccaccaggtgctgttttgatatttttgcctggtctagca
gaaatcaagatgctttatgagcagcttcagtctaatgcactttttaataacagacacagc
aagaggtgtgttgtttatccacttcactcttcactgtctagtgaagaacagcaatctgtg
ttcctcaggcctcctgcaggggttaccaaaatcatcatctctacaaacattgcagaaaca
tctgtcaccattgatgatgtggtctatgtgattgattctggaaaaatgaaagagaaaaga
tatgacccaggcaaaggaatggaaagtctggaagatacatttgtgtccaaggccaatgcc
ctgcagaggaaagggcgagcaggccgtgtagcctcaggcgtctgctttcatcttttcagc
agccaccactacaaccatcagcttgtaaaacaacagttaccagaaatacaaagagtgccc
ttggagcagctctgtctgagaattaagatcctggagatgttttctgcacagagtcttcac
tctgtcttgtcacgactaatcgagcccccgagaaccgagtctctgcaagcctcaaaggtg
cgactacaagccttgggagcattaactcctgatgaaaagctcacccctctgggatatcac
ttagcttcactgcctgttgatgtcaggattgggaagctgatgctgtttggcaccatcttc
cgctgcctggatcctgcactaacgatcgcagccagcctggcctttaagtccccttttgtg
tcaccatgggataaaagggaagaagcaaacaaaaagaagttggagtttgcagtaggaaac
agtgactacctggctcttctccaggcctacaagggatggcgtttaagtatcgaagaggga
tctcaagcaagctacaactactgcagggagaacttcttgtcaggaagagttcttcaggaa
attgccagtctgaagcggcagtttgcagagctgctttctgacattgggtttgtgaaggag
ggattgaaagccagggacattgagaagaagtggtcccaaggaggtgatggtgtgttggat
gccacgggagaagaggcaaattcgaatgcagagaacatcaagctgatctcagctatgttg
tgtgctgctctgtatcccaacgttgtgcaggtgaaaaagccagaaggtaaataccagaag
accagtacaggagcagtcaaaatgcaaccaaaagcagaagagctgaagtttgttaccaaa
aatgatggttatgttcacattcatccttcatctgtgaattatcagaccaggcactttgag
agcccctacctggtgtaccacgagaagatcaagacgagccgcgtgttcatccgggactgc
agcatggtgtccgtgtacccgctggtgctgctcgggggcgggcaggtgcacatgcagctg
cagaagggggagtttgtcatttccctcgatgacgggtggatacggttcgtggctgcctct
caccaggtggctgagctggtgaaagagctgcgctgtgaactagaccagctgctgcaggat
aaaatcaagaatcccagcatggatttgtgcatgtgcccccgtggatctcggatcatcggg
atgattgtaaagcttgtgaccacacagtga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (27)   

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