KEGG   Escherichia coli UMNK88 (ETEC, porcine): UMNK88_523
Entry
UMNK88_523        CDS       T02001                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunits gamma and tau DnaX
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
eun  Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun03030  DNA replication
eun03430  Mismatch repair
eun03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:eun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UMNK88_523 (dnaX)
   03430 Mismatch repair
    UMNK88_523 (dnaX)
   03440 Homologous recombination
    UMNK88_523 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:eun03032]
    UMNK88_523 (dnaX)
   03400 DNA repair and recombination proteins [BR:eun03400]
    UMNK88_523 (dnaX)
Enzymes [BR:eun01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     UMNK88_523 (dnaX)
DNA replication proteins [BR:eun03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     UMNK88_523 (dnaX)
DNA repair and recombination proteins [BR:eun03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     UMNK88_523 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_tau_5 DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_4 AAA AAA_22 AAA_5 DNA_pol3_delta RuvB_N AAA_18 AAA_14 AAA_2 AAA_16 ResIII AAA_assoc_2 AAA_7 nSTAND3 PIF1 TsaE
Other DBs
NCBI-ProteinID: AEE55170
Position
528162..530024
AA seq 620 aa
MLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIE
QGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTL
EEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRAL
QLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGER
VMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPT
DIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAV
MTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVN
NAALERLASVTDRVQTRPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEH
EKTPELAAKLAAEAIERDAWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHL
NNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNN
IQTLRRFFDAELDEESIRPI
NT seq 1863 nt   +upstreamnt  +downstreamnt
gtgctgaccgcactggcgaacggcttgtcgttagggcgtattcatcatgcttatcttttt
tccggtacccgtggcgtcggaaaaacctctatcgcccgactgctggcgaaggggctaaac
tgcgaaaccggcattaccgcgacgccgtgcggtgtgtgcgataactgtcgtgaaatcgag
caggggcgctttgtcgatctgattgaaatcgacgccgcctcgcgcaccaaagttgaagac
actcgcgacctgctggataacgtccagtacgctccggcgcgtggtcgtttcaaagtttat
ctcatcgacgaagtgcatatgctgtcgcgtcacagctttaacgcactgttaaaaactctt
gaagagccgccggagcacgttaagtttctgctggcgacgaccgatccacagaaattgccg
gtgacgattttgtcgcgctgtttgcaatttcatctcaaggcgctggatgtcgagcaaatt
cgccatcagcttgagcacatcctcaacgaagaacatatcgctcacgagccgcgggcgctg
caattgctggcacgcgccgctgaaggcagcctgcgagatgccttaagtctgaccgaccag
gcgattgccagcggtgacggtcaggtttcaacccaggcggtcagtgcgatgctgggtacg
cttgacgacgatcaggcgctgtcgctggttgaagcgatggtcgaggccaacggcgagcgc
gtaatggcgctgattaatgaagccgctgcccgtggtatcgagtgggaagcgttgctggtg
gaaatgctcggcctgttgcatcgtattgcgatggtacaactttcgcctgctgcacttggc
aacgacatggccgccatcgagctgcggatgcgtgaactggcgcgtaccataccgccgacg
gatattcagctttactatcagacgctgttgattggtcgcaaagaattaccgtatgcgccg
gaccgccgtatgggcgttgagatgacgctgctgcgcgcgctggcgttccatccgcgtatg
ccgctgcctgagccagaagtgccacgccagtcctttgcacccgtcgcgccaacggcagta
atgacgccaacccaggtgccgccgcaaccgcaatcagcgccgcagcaggcaccgactgta
ccgctcccggaaaccaccagccaggtgctggcggcgcgccagcagttgcagcgcgtgcag
ggagcaaccaaagcaaaaaagagtgaaccggcagccgctacccgcgcgcggccggtgaat
aacgctgcgctggaaaggctggcttcggtcacagatcgcgttcagacgcgtccggtgcca
tcggcgctggaaaaagcgccagctaaaaaagaagcgtatcgctggaaggcgaccactcca
gtgatgcagcaaaaagaagtggtcgccacgccgaaggcgctgaaaaaagcgctggaacat
gaaaaaacgccggaactggcggcgaagctggcggcagaagccattgagcgcgacgcgtgg
gcggctcaggtgagtcaactttcgctaccaaaactggtcgaacaggtggcgttaaatgcc
tggaaagaggagagtgataacgcagtatgtttgcatttgcgctcctctcagcggcatttg
aacaaccgcggtgcacagcaaaaactggctgaagcgttgagcatgttaaaaggttcaacg
gttgaactgactatcgttgaagatgataatcccgcggtgcgtacgccgctggagtggcgt
caggcgatatacgaagaaaaacttgcgcaggcgcgcgagtccattattgcggataataat
attcagaccctgcgtcgttttttcgatgcggagctggatgaagaaagtatccgccccatt
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (31)   

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