KEGG   Glaesserella sp. 15-184: CJD39_02545
Entry
CJD39_02545       CDS       T05643                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
gle  Glaesserella sp. 15-184
Pathway
gle03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gle00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CJD39_02545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gle03019]
    CJD39_02545
   03009 Ribosome biogenesis [BR:gle03009]
    CJD39_02545
Enzymes [BR:gle01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CJD39_02545
Messenger RNA biogenesis [BR:gle03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CJD39_02545
Ribosome biogenesis [BR:gle03009]
 Prokaryotic type
  rRNA helicases
   CJD39_02545
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 DRTGG AAA_22
Other DBs
NCBI-ProteinID: AUI65527
Position
556973..558814
AA seq 613 aa
MTETTLTFADLGLPQSILDAVNEMGFVTPSPIQQACIPHLLNGRDVLGMAQTGSGKTAAF
SLPILAQLDPEQRHPQMLVMAPTRELAIQVADACEQFTKNMRGIRTVTIYGGQRYDIQIR
ALKNGAQVVVGTPGRILDHIRRGTLDLSMLKAIVLDEADEMLRMGFIEDVETVMAELPED
HQTALFSATMPEPIRRITKRFMKDPQEVKIQATQRSAPDIAQSYWLVNGFRKNDALLRFL
EVEEFDAAIIFTRTKTGTIDIAELCERNGYRAAALNGDMTQQAREQALDKLKSGRLDVIV
ATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLKNI
EHLIKKPIDEVPVPNHEILMEKRREKFKARISLQLEHHDLELYRELLEDLFTADQDHEEL
AAAMMMLLQEKQKLILPPDPEIRPARGERGKGRENPRSAERRGGGREHRDNNGVAMDLYR
IELGREDGVEVRHIVGAIANEGDINSRYIGHIKLHDKYSTIELPQGMPKHLVEHFAHKAR
VLSKPMQMSLLGAASSATNANPYEDKGSRGKGRSDRHERGGRGGRDSRREERGFKERKEG
GFKEKRFSDRGRR
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgactgaaacaactttaacctttgccgatttaggcttaccacaatctatccttgacgct
gtaaatgaaatgggttttgtaaccccatcaccaatccaacaagcctgtattccacaccta
ttaaatggtcgtgatgtattaggtatggcacaaacgggtagtggtaaaacagcggcattt
tctctgccgattttggcacaacttgacccagaacaacgccaccctcaaatgttagtgatg
gcaccaactcgtgagcttgcaattcaagtggcagatgcttgtgaacaatttactaaaaat
atgcgtggtattcgcacggtcaccatttatggcggtcagcgttatgatattcaaatccgt
gctttgaaaaatggcgctcaagtggtagtgggtacaccggggcgtattcttgaccatatt
cgtcgtggcacgctagatctttcaatgctaaaagcaatcgtacttgatgaagcagacgaa
atgttacgtatgggctttattgaagacgtggaaacggtaatggctgaattgccagaagat
caccaaacggcacttttctcggcgacaatgccagagccgatccgccgtattaccaagcgt
tttatgaaagatccgcaagaagtgaaaattcaagcgacccaacgttctgcccctgatatt
gctcaaagttactggttagtgaacggtttccgtaaaaatgatgcattattacgcttctta
gaagtggaagaatttgatgcagcgatcatctttactcgtaccaaaacggggacgattgat
attgcggaactttgcgaacgcaacggctatcgtgcagcagcgttaaacggtgatatgacc
caacaagcccgtgagcaagcattggataaattaaaatcaggtcgtttagatgtgattgta
gcaacagacgtggcggctcgtggtatcgacattgaacgcatcagccttgtagtgaactac
gatattccgctagatgccgagtcatatgttcaccgtatcggtcgtacaggtcgtgcaggg
cgttcaggtcgtgcgttattgtttgtagaaccccgtgagcgtcgcttattgaaaaatatc
gaacatctgattaaaaagccgattgacgaagtgccagtgccaaatcacgaaattttaatg
gaaaaacgccgtgagaaattcaaagcacgcatttcattgcagttagaacaccacgattta
gagctttaccgtgagttgctcgaagatttattcaccgcagaccaagaccacgaagaatta
gcggcggcgatgatgatgttgttacaagagaagcaaaaacttattcttccgcctgatcct
gaaattcgtcctgctcgtggtgagcgtggcaaagggcgtgaaaatccacgttcagcagag
cgccgtggtggcggtcgtgaacatcgtgataacaacggcgtggcaatggatctctaccgt
atcgaactcggtcgtgaagatggtgttgaagtacgccacattgtcggggcgattgctaat
gaaggtgatatcaatagccgctatatcggacatatcaaattgcacgataaatactcaacc
attgagctaccacaaggtatgccgaagcatttagtggaacactttgcacacaaagctcga
gtattaagcaaaccaatgcaaatgtctctattaggggctgcaagtagtgcaaccaatgca
aacccttatgaagataaaggttctcgtggaaaaggcagaagcgatcgtcatgagcgtggt
ggacgtggtggcagagatagtcgtcgcgaagaacgtggttttaaagagcgtaaagaaggc
ggatttaaagagaaacgttttagcgatcgcggtcgtagataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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