KEGG   Helicobacter pylori 35A: HMPREF4655_20121
Entry
HMPREF4655_20121  CDS       T01892                                 
Symbol
dnaA
Name
(GenBank) chromosomal replication initiator protein DnaA
  KO
K02313  chromosomal replication initiator protein
Organism
hpo  Helicobacter pylori 35A
Pathway
hpo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:hpo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HMPREF4655_20121 (dnaA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpo03032]
    HMPREF4655_20121 (dnaA)
   03036 Chromosome and associated proteins [BR:hpo03036]
    HMPREF4655_20121 (dnaA)
DNA replication proteins [BR:hpo03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HMPREF4655_20121 (dnaA)
Chromosome and associated proteins [BR:hpo03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    HMPREF4655_20121 (dnaA)
SSDB
Motif
Pfam: Bac_DnaA Bac_DnaA_C IstB_IS21 DnaA_N ATPase_2 nSTAND3 AAA Viral_helicase1 AAA_22 T2SSE ResIII AAA_19 AAA_14 Sigma54_activat SRP54 AAA_7 KAP_NTPase AAA_16 AAA_28 RuvB_N TsaE RNA_helicase
Other DBs
NCBI-ProteinID: ADU40291
Position
complement(120165..121532)
AA seq 455 aa
MDTNNNIEKEILALIKQKVSLTEYENCLSQLKYNANASKSDIAFFYAPNMLLCNWITAKH
GALLKEILSQNKVGMHLAHSVDVRIEVAPKIQINAQANINYKAVKTSVKDSYTFENFVVG
SCNNTVYEIAKKVAQSDTPPYNPVLFYGGTGLGKTHILNAIGNHALEKHKKVVLVTSEDF
LTDFLKHLDNKTMDSFKKKYRHCDFFLLDDAQFLQGKPKLEEEFFHTFNELHANSKQIVL
ISDRSPKNIAGLEDRLKSRFEWGITAKVMPPDLETKLSIVKQKCQLNKITLPEEVMEYIA
QHISDNIRQMEGAIIKISVNASLMNATIDLNLAKTVLEDLQKDHAEGSSLENILLAVAQS
LNLKSSEIKVSSRQKNVALARKLVVYFARLYTPNPTLSLAQFLDLKDHSSISKMYSSVKK
MLEEEKSPFILSLREEIKNRLNELNDKKTSFNSSE
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggataccaacaacaatattgaaaaagaaatcttggcgctaatcaaacaaaaagttagc
ctcacagagtatgaaaattgcttaagccagctcaaatacaacgctaatgcgagcaagagc
gacattgcctttttttatgcccctaacatgcttttatgcaattggattacggctaaacac
ggcgcgttgcttaaagaaattttaagccagaataaagtcggcatgcatttagcccatagc
gtggatgtgcgtattgaagtagcgcctaaaatccaaattaacgctcaagctaatatcaat
tataaagcggtaaaaacgagcgtcaaagactcttacacttttgaaaatttcgtcgtaggc
tcatgcaataacaccgtttatgaaatcgctaaaaaagtcgcccaaagcgataccccccct
tataacccggtgcttttttatggcggcacagggttaggcaaaacgcacattttaaacgct
atcggtaaccatgccctagaaaagcataaaaaagtcgtgttagtcacttcggaagatttt
ttgacagattttttaaagcatttagacaacaaaaccatggattcttttaaaaaaaaatac
cgccattgcgactttttcttgttagatgacgctcaatttttgcaaggaaaacccaagcta
gaagaagaatttttccacacttttaacgaattgcacgccaatagcaaacaaatcgtattg
atttcagaccgatcgcctaaaaacatcgccggattagaagatcgcttaaaatcgcgcttt
gaatgggggataaccgctaaagtcatgccccctgatttagaaaccaaactttccattgtc
aaacaaaaatgccaactcaataaaatcactttgcctgaagaggtgatggaatacatcgcc
caacacatcagcgacaacatccgccaaatggaaggcgcaatcattaaaatcagcgtgaat
gcgagcttaatgaacgctaccattgatttgaacctcgctaaaaccgttttagaagatttg
caaaaagatcatgctgaaggctcaagcttagaaaatatcttgctcgctgtcgcgcaaagc
ctgaatctcaaatccagtgaaatcaaagtctcttcgcgccaaaaaaatgtcgctctagcg
agaaaattagtcgtgtatttcgccaggctttatacccctaaccccacgctctcgctcgct
caatttttggatttaaaggatcattctagcatttctaaaatgtattctagcgttaaaaaa
atgcttgaagaagaaaaaagcccttttatcttaagtcttagagaagaaatcaaaaaccgc
ctgaacgaattgaacgacaaaaaaacctctttcaattcaagtgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (30)   

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