KEGG   Ephemeroptericola cinctiostellae: DTO96_101185
Entry
DTO96_101185      CDS       T05560                                 
Symbol
deaD_1
Name
(GenBank) ATP-dependent RNA helicase DeaD
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
hyf  Ephemeroptericola cinctiostellae
Pathway
hyf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hyf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DTO96_101185 (deaD_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hyf03019]
    DTO96_101185 (deaD_1)
   03009 Ribosome biogenesis [BR:hyf03009]
    DTO96_101185 (deaD_1)
Enzymes [BR:hyf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DTO96_101185 (deaD_1)
Messenger RNA biogenesis [BR:hyf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DTO96_101185 (deaD_1)
Ribosome biogenesis [BR:hyf03009]
 Prokaryotic type
  rRNA helicases
   DTO96_101185 (deaD_1)
SSDB
Motif
Pfam: DEAD DbpA Helicase_C ResIII CMS1 HEM4 UvrA_inter AAA_19 Ribosomal_L12_N
Other DBs
NCBI-ProteinID: AXF85454
UniProt: A0A345DAR6
Position
1286379..1288577
AA seq 732 aa
MSEVVSEVVSEIIENPPVSFADLTLSEPLLRSLHDIGYEYPSPIQAATIPTLLGGRDVLG
QAQTGTGKTAAFALPILSNIDMAQTAPQALVLAPTRELAIQVAEAFQTYAKHMPNFHVLP
IYGGQSYGPQLSALRRGVHVVVGTPGRVIDHLDKGSLDLSQLKTLVLDEADEMLRMGFID
DVERILKETPPTRQTALFSATMPAAIKRIAQTYLNKPEMVTIAAKTGTADNIRQRYWLVS
GMHKLDALTRILEAETFDGMIIFARTKLGTEELAAKLSARGFSVAAINGDVQQQQRERTI
QQLKDGKIDILVATDVAARGLDVERISHVVNYDVPHDPESYTHRIGRTGRAGRSGEAILF
ITPREKHLLKVIERATRQPVSPLELPTVQDVNNVRITRFKTQISDVLAEGGLEEFASLIE
DYEREHNVPAIEIAAALAKMARGNSSLLLSKKSHPVFEEREVRSDVRFERQREAAPQREY
KPRSANAGAQTYRIAVGHEHGVKPGNIVGAIANEANIESRYIGRIDIRDEYTLLDLPSDL
SPETIEHLRGVRVAGQMLNIQADGQSMPPAPRGPRRERSEYTERAERHERNESFERKARV
ERTEQQPVRAEFADRLDRPERAERAKANPSKYTMHTYRIDIGGADAVTKSGIVEAIANGA
GLQAKLIGRIQLLDGHSNIDLPEGMPEDVLNRLKTVQIDGKSLNMRYVGLSDAGENRPKD
ETERKKKSTKKK
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgtctgaagttgtgtccgaagttgtttctgaaatcattgaaaatccacctgtgtctttt
gccgatttgaccttgagtgagccgttattgcgctcgcttcatgacattggttatgagtat
ccatcgccgattcaggcggcgacaatccctacgttgcttggtgggcgtgatgtgttggga
caggcgcaaacggggacgggtaaaacagcggcgtttgctttgcctattttgtcgaacatt
gacatggcgcaaaccgcccctcaagctttggtgctggcgccaacacgtgagttggcgatt
caagtggctgaggcttttcagacctatgcgaagcacatgccgaatttccatgtgttgcca
atttatggtggtcaaagttatggcccgcaattgtccgctttgcgccgtggcgtgcatgtg
gtggtgggcacaccgggtcgtgtgattgaccatttggacaaaggttcacttgatttgtct
cagctcaaaacattggtgttggatgaagcggatgaaatgttgcgcatggggttcatcgac
gatgtggagcggattttgaaagaaacaccgccgacgcgtcaaaccgctttgttctctgcg
acgatgcccgctgcgatcaaacggattgcccagacgtatttaaacaagcccgaaatggtc
acgattgctgcgaaaacaggcacggcggacaacatccgtcaacgttattggttggtcagc
ggcatgcataaattggatgctttgacgcgcattttagaagctgaaacttttgacggcatg
atcatttttgcgcgtacaaaattgggcacggaagagctcgcagcgaaattgtcagcgcgc
ggtttttctgtcgcggcaatcaatggcgacgtgcaacagcaacaacgcgaacgcacgatt
caacaactcaaagatggaaaaattgacatccttgtcgccaccgatgttgcagcacgcggc
ttggacgttgagcgcatcagccatgtcgtcaactacgatgtaccccatgatcctgagagc
tatacccaccgcattggtcgtacaggtcgcgctgggcgcagcggtgaggcgattttgttc
atcacgccacgtgaaaagcatttgctcaaagtcattgaacgggccacccgtcaacctgtt
tcaccgcttgaattgccaacggtgcaagatgtgaataatgtgcgcatcacgcgttttaaa
acacaaatttctgatgtgctcgccgaaggtggactggaagagtttgccagcttaatcgag
gattacgagcgcgaacacaatgtgcctgccatcgaaatcgctgcggcattggccaaaatg
gcacgtggcaattcctctttgctgttgagcaaaaagagtcatcctgtttttgaagagcgt
gaagtgcgcagtgatgtgcgttttgagcgccaacgtgaggcggcaccacagcgagaatac
aaaccacgcagcgccaatgcaggtgcacagacgtatcgcattgcggtgggtcatgaacat
ggtgtcaaacctggtaacatcgtcggtgcgatcgccaatgaagcgaacatcgaatcgcgt
tacattgggcgcatcgacatccgtgacgaatacaccttgcttgatttgccgagtgattta
tcccccgaaaccatcgagcacctgcgcggtgtgcgtgtggctgggcagatgttgaacatt
caagccgacggtcaaagcatgccaccagcaccacgtggaccaagaagagagcgctcagag
tacactgaacgtgcggaacgtcatgagcgcaacgaatcttttgaaagaaaagcgcgcgtg
gagcgcacagagcaacaacctgtccgcgccgagtttgctgaccgtttagatcgtcctgag
cgtgccgaacgtgccaaggccaaccccagcaaatataccatgcacacctatcgcatcgac
attggtggtgccgatgccgtgaccaaaagcggtattgttgaagccattgccaatggcgca
ggtttacaggccaaattgattggtcgcattcaattgctggatggacacagcaatattgac
ctcccagaagggatgcctgaagatgtgttaaaccgccttaaaacggttcaaattgatggc
aagtcgttgaacatgcgctatgtgggtttgagcgatgcaggtgaaaatcggccgaaagat
gaaaccgaacgcaagaaaaaaagcaccaagaagaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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