KEGG   Kryptolebias marmoratus (mangrove rivulus): 108235120
Entry
108235120         CDS       T05608                                 
Symbol
tdrd9
Name
(RefSeq) ATP-dependent RNA helicase TDRD9
  KO
K18408  ATP-dependent RNA helicase TDRD9 [EC:5.6.2.5]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:kmr03036]
    108235120 (tdrd9)
Enzymes [BR:kmr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.5  RNA 5'-3' helicase
     108235120 (tdrd9)
Chromosome and associated proteins [BR:kmr03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    108235120 (tdrd9)
SSDB
Motif
Pfam: TUDOR Helicase_C DEAD HA2_C HA2_N ResIII nSTAND3 AAA_14 AAA_22 T2SSE PhoH AAA_19 AAA_7
Other DBs
NCBI-GeneID: 108235120
NCBI-ProteinID: XP_017270411
Position
LG10:complement(12940099..12958842)
AA seq 1331 aa
MRKTFTAEQISNWFTSGKSFVSIKLSDEGVERRSDGPSSTEISPAKPLEDSPKSDGVQCQ
KPEPLRCTGPPVLTSNEYPSLPICKNRQELISLIENNSVVIIRGATGSGKTTQLPQYILD
HYNEKNAPCNIVVTQPRKIGATSIARWVATQRKCTLGSMVGYQVGLEKLATEHTRLIYMT
TGVLLQKLVLSKCLTEFSHIFLDEVHERTEEMDFLLLVVRKLLHSNSRYIKIILMSATIN
CREFAEYFATPVYGKMSPAYVFEVEGAPYAVEEFYLDDLHRFLPCRVEPPHSDDPSISPE
MYNLAINLIQSFDEMESRDFSKKETKDRTAFSETGSVLVFLPGLHEINHMQDALAKLAFK
RFQVYPLHSTVTLEEQNGVFLPPVPGYRKVILSTNIAESSVTVPDVKYVIDFCLARHLVC
DNETNYQSLRLTWASKTNCNQRKGRAGRVSKGYCYRLVTKAFWRGEIPDYMIPEMLLAPL
TTIMLKVKLLDMGDPRSLLSTALSPPNLSDIVRTVLQLKEMGALSAKNKCSGQNDDGELT
FLGRVLAHLPVDLHLGKMIVLGHVFGCLDECLIIAASHSLKSFFAIPFMHQLAGYRSKLA
FARGTPSDSIAFVNAFKTWYSSKKKGQLRHPKDEQNWGSENFIQIKRIREVAELYEDLKK
RVSQFNMHISEEAQSSDYTSTHKQKFILQMVIAGAYYPNYFFHGEIDNNLASKELSGFNP
RTTVMVRNIPPYGFLYYKQLQSLFRLCGQVKTISFESSRAYVEFYRTSGDSGVLPEVSLA
LFMANQNSPMQLSVYPTEQIESCSGSRPITHMKFSRMNADIQSQSVSPLGLSSSIDLTKL
PSNRLFVVNITEVLDVGHFWGFPADEASLEKQRLLTGEINKRTLNPVTVSFYPNLLCLAP
YSESSEQSLYYRAKILHMRGNTVEVLFLDFGNTSVVSCDSLRELPSDLLSHPFQAQEFQV
AEMCQSAESIILGNQWSSRARNRFMVLVKDQSVFVSLYSILYDVMRVEVFINMESKKTSV
VDILVEEGYAVKAEENFDSQQSHEALMTLYKDMEKGTYVPISANSAWKEREKEEKELIDS
LLAHFSKYPPSGSKALQVCLKGPSSPYKINFHSLCRKIFCRPASVDRTSINSMALNENPH
HKHLRMLVATSVSVSSTGTRIILRETSILPNIPGLPGLMMMLFAPFMELRTNEERTCYSG
ALFGLGFNSQTKAAILPENDIELAFDVRFDVEDITEINALRVAINRLLCNGPSSTLHLGP
DKISQLQEECRDRLTRLFMRSPPREAVPPLYYEKPGKWNQIDPSLKMNIAEPGGGNARGV
LFQLHPVVLLN
NT seq 3996 nt   +upstreamnt  +downstreamnt
atgaggaaaactttcactgctgaacaaatttccaactggtttacttcagggaaatctttt
gtgagcattaaactttccgatgagggggttgaaagaaggagtgatggaccgtcctcgaca
gaaatcagtccagcaaagcctcttgaggacagcccaaagtctgatggcgtgcagtgccaa
aaaccagaacctttaagatgcactggaccgcctgtcctcaccagtaacgagtacccaagc
ttacccatatgcaaaaacagacaagaactgatttccctcatagaaaacaactctgttgtc
atcattcgaggagccacaggcagtggcaagaccactcagctgccacagtacattttggac
cattacaatgaaaaaaatgccccatgcaacatcgtggtcacccagccacgcaaaattgga
gccaccagtattgctcgatgggttgccacacagaggaaatgtaccctgggtagtatggtt
ggatatcaggttgggctggagaagttggccacagagcacacgcgactcatctacatgacg
acgggagtcctgctgcagaaactggttttatccaagtgcctcacagagttttcacacata
tttttggatgaggttcacgagcgcacagaggagatggacttcctgctgttggttgtaaga
aaacttcttcattccaactctcgatacatcaagataatcctcatgtcagctaccattaac
tgcagagagtttgccgagtactttgccacaccagtttatggtaaaatgagccccgcctac
gtgtttgaggtggagggggcgccctacgctgttgaggagttctacttggatgatctccac
agatttcttccatgcagggttgagccgcctcattcagatgacccttccatctcacctgag
atgtacaatcttgccatcaatctcatccaaagcttcgacgaaatggaaagcagggatttt
agcaagaaggagacaaaggataggacagctttctcagaaacaggaagtgttttggttttc
cttcctggtttacatgagataaaccacatgcaggacgccctggcaaaactggcgttcaaa
agatttcaggtttaccccctccactcgacagtaactctagaagagcagaacggtgttttc
cttccccctgtacctggatacaggaaggtgatcctttccaccaacatcgcagagagttca
gtgactgttccagacgtcaaatatgtgattgacttctgcctggctcgacacttggtctgt
gacaatgagactaattatcagtctctgcgtctgacctgggcatccaaaaccaactgcaac
cagcgtaaaggtagggcaggtcgagtgtcaaagggctactgttaccgtcttgtgaccaaa
gctttctggaggggtgaaatccctgactacatgattcctgagatgctgcttgctcccctg
accaccatcatgttgaaggtgaagcttctggacatgggagatccccgctccctcctctcc
acagccctctcacctcccaacctgagtgacattgttaggactgtgcttcaactcaaggag
atgggcgctctgtctgcaaaaaacaagtgcagcggacaaaacgacgatggcgagttgaca
tttctcggccgggtgctggcccacttgcctgtagacctgcacctggggaagatgatagtt
ctgggtcatgtctttggctgcctggacgaatgtctcatcatagctgcctcacactctctg
aaaagcttctttgcgattccattcatgcatcagctcgcaggctacaggagcaagctggct
tttgcccgtggcacaccgagcgattccattgcctttgtcaatgccttcaagacatggtac
tcatccaaaaagaaaggacaactgagacacccaaaggatgagcagaactggggaagcgag
aacttcattcaaatcaagaggatcagagaggttgcagagctgtacgaagatctgaagaag
cgcgtgtcgcagttcaacatgcacatctcagaggaggctcagtcttcagactacaccagc
acacacaagcagaagtttattctgcagatggtcatcgctggtgcctactaccccaactac
ttcttccacggggagatcgataacaacctggcatctaaagagctgagtggcttcaaccca
agaacaactgtgatggtgaggaacatccctccgtacggtttcctgtactacaagcagctc
cagtctttgttccgcttgtgtggacaggtcaaaaccatttcttttgagagctccagagcg
tacgtggagttctacaggacatccggggactcaggggtgctccctgaggtgtctcttgcc
ctcttcatggccaatcagaactctccaatgcagctttcagtctaccccactgaacagatt
gagtcctgctctggaagcagaccaataactcacatgaaattttctcggatgaatgcagac
atccagagtcagtctgtctccccactcggactgagcagcagcatcgacctgactaagctg
ccttccaatcgcctctttgtcgtgaacatcaccgaggtgttggacgtgggtcatttctgg
gggttcccagcagatgaagccagcttggaaaagcaacgccttctgactggagagatcaac
aagcgtaccctgaatcccgtgacggtgtctttctaccccaacctgctgtgtctggcgccg
tactctgagagcagcgagcagagtttgtattaccgagccaagatcctgcacatgcgcggt
aatactgtggaggtcttgtttttggactttggcaacacatcagttgtgtcctgcgacagc
cttagagaactcccatctgacctgctgtctcacccttttcaggcccaggagttccaagtt
gctgaaatgtgtcagtcagcggagtccatcatcctggggaaccagtggagcagccgcgcc
cgcaaccgcttcatggttctggtgaaggaccagtcggtgttcgtgtctctgtactccatc
ctctacgatgtcatgcgtgtggaggtgttcatcaacatggagtcgaagaagaccagtgtg
gtggacatattggtggaggagggatatgctgtgaaggctgaggagaactttgattcccag
caaagtcacgaggcactgatgactctgtacaaggacatggagaaaggaacatatgttccc
atttctgccaacagtgcctggaaggagcgcgagaaagaggagaaggagcttatcgacagt
ctgcttgctcacttctccaaatacccaccatccggatcaaaggcacttcaagtttgtctg
aaaggaccgtcaagcccttacaagataaacttccacagcttgtgcaggaaaatcttctgc
aggccggcatctgtggacaggaccagcatcaactccatggcactgaatgaaaacccacat
cacaaacatctgaggatgctggtggctacgtctgtgtcagtcagctccacgggtactcgt
ataatcctgagagagacttccatcctgcccaacatccctggactgcctggcctgatgatg
atgctcttcgcccccttcatggagttacgcactaatgaagaaaggacctgctactctggt
gccctttttggtttgggcttcaacagccaaacaaaagcagccatcctacctgagaacgac
atcgaactggccttcgacgtcaggtttgacgttgaggacatcaccgagataaacgctttg
cgagtggccatcaaccgcctgttgtgcaacggtcccagcagcacactgcatcttggacct
gacaaaatcagccaactacaggaggagtgccgggaccgcctcaccagactcttcatgagg
tctcctccgagagaagctgtccctccactgtactacgagaaaccaggaaagtggaaccaa
attgatccttctctgaagatgaacatcgcagagccaggaggcggaaacgccagaggtgtt
ctcttccagctgcatcctgtcgttctcctcaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

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