KEGG   Kryptolebias marmoratus (mangrove rivulus): 108237358
Entry
108237358         CDS       T05608                                 
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
  KO
K16911  ATP-dependent RNA helicase DDX21 [EC:5.6.2.7]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:kmr03009]
    108237358 (ddx21)
   03036 Chromosome and associated proteins [BR:kmr03036]
    108237358 (ddx21)
Enzymes [BR:kmr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     108237358 (ddx21)
Ribosome biogenesis [BR:kmr03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    108237358 (ddx21)
Chromosome and associated proteins [BR:kmr03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    108237358 (ddx21)
SSDB
Motif
Pfam: DEAD GUCT Helicase_C ResIII CMS1 ERCC3_RAD25_C Laman-like_dom
Other DBs
NCBI-GeneID: 108237358
NCBI-ProteinID: XP_017274208
UniProt: A0A3Q3BPG7
Position
LG15:complement(11273777..11283396)
AA seq 754 aa
MPSKVIFESEEHIMDEDVDTVAEATTLKVKNKTKEGKKKKQQQQELEEEQDADCDPPAPK
KKKKKDKLAADQVNGHTDEATDMNSNCNDVESPKQKTKKKKEATEKNKKEKKAVTEAATN
GHSTPNTPVQTPVPTPSQSSDDSASDSERENKLTQEQREGAFSNFRISKVTIDKLKARGV
SYLFDIQVKAFNDVYDGEDVIAQARTGTGKTFSFAIPLVEKLQKDSEKKTRGRPPKVLVL
TPTRELAIQVAKDFKDISKSVVISCFYGGSSYKPQIDAIRNGIDILVGTPGRIKDHLQNN
KLNLSEVNHVVLDEVDQMLDMGFAEQVEEILSSSYKKDGSTNPQTLLFSATCPPWVYDVA
KKYMRPGCKHIDLIGKKTQKAATTVEHLAIACHWSQRAAVLGDVIQVYSGSHGRTIVFCE
TKKEANELSLNESIKQNAQSLHGDIPQKQREMTLKGFRNGAFEVLVATNVAARGLDIPEV
DLVIQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVEHKAGITFRRVGVP
TANDIIKSSSKDAVRFLDSVPVTAIEYFRASAEKLIEEKGAVDALAAALAHISGATSLEM
RSLLNSDAGYTTVQLLCSQEMHNIGYAWKAIKEQLGEEFENQIHRMTFLKSRTGVCFDVP
ADKVKEIQEQWKDGRRWHLTVATELPELEEKQFSNRGKRGFGSGNRGDRGGFRGGRGRNF
GGNGGRSNGYRGGGGGYGNNRGGQKRTFSQAFHY
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgccgtcaaaagtcatctttgaaagcgaggagcatatcatggatgaagatgtggacact
gtcgcggaggctacgaccttaaaggtgaagaacaagaccaaggagggcaagaagaagaaa
caacagcaacaagagcttgaagaggagcaggatgcagactgtgaccctcctgcaccaaag
aagaaaaagaaaaaagacaagctggcagcggaccaagttaacggccacacagatgaggcc
actgacatgaacagtaactgcaatgacgtagaatcaccaaagcagaaaaccaagaagaaa
aaagaagcaaccgagaaaaacaagaaagaaaagaaggcagtcacagaggcagcaaccaat
ggacattccaccccaaacacaccagttcaaactcctgtcccgacgccatctcagtccagt
gacgactcagccagtgacagtgaacgggaaaataagctgacacaggagcagagagaagga
gcattctccaacttcagaatctcaaaagttaccatcgataaacttaaagcccggggagtc
tcctacttgtttgacattcaggtaaaggcgtttaatgatgtctacgatggcgaggatgta
attgcccaagcccgcacaggaacaggaaagaccttctcatttgctatacctttggtggag
aagctccagaaggattcagaaaagaagaccagaggccggcctcctaaggtgctggtgctg
actcctaccagagagttggctatccaggttgcaaaggacttcaaagacatctccaagagt
gtggtcatttcctgtttttatggaggcagctcatacaagcctcaaattgatgccatacgt
aatggaattgatattttggttggaactcctggtcggataaaagatcaccttcagaacaat
aaactcaacctctctgaagtaaatcacgtcgttctggatgaagtagaccaaatgttggac
atgggatttgcagaacaggttgaagagattttgagttcatcatacaagaaagacggcagc
actaacccacagacgcttctgttttcggccacctgccctccctgggtgtatgatgtggcc
aagaaatacatgagaccggggtgcaagcatatcgacttgattggcaagaaaacacagaaa
gctgcaacaactgttgaacatctggccatagcctgccattggtcacagcgtgcagcagtg
ttaggagacgtgatccaggtttacagcggcagccacggcaggaccatcgtcttctgtgag
acgaaaaaagaagccaatgaactttccttaaatgaatccatcaaacagaatgcccagtcc
cttcacggtgatattccacagaagcagagagagatgactctgaaaggcttcaggaatggt
gcctttgaggttctggttgccacaaatgttgcagcccgtggattagacatccctgaagtg
gacctggtgatccagtgttctcctcctaaggacgtagaatcgtacatccatcgttcagga
cgaacaggccgcgcaggcaggactggagtctgcatctgcttctatcagaggaaagaagag
gaccagctgcgctacgtggagcacaaagcaggcatcacattcaggagggttggtgttcca
actgcaaatgatatcatcaagtcatcaagcaaagatgcagtcaggttcctagactctgtt
ccagtcacagctattgaatatttccgagcatcagctgagaagctgatcgaagagaaagga
gcagtagatgcactcgctgctgctctggcccatatctctggagccacaagtctggagatg
agatcactgctcaactctgatgctggctacaccactgtccagctgctgtgctctcaggag
atgcataatatcggttatgcttggaaagccatcaaagagcagcttggagaggagtttgaa
aaccagattcacaggatgaccttcctgaaaagcagaacaggagtttgttttgatgtccca
gctgataaagtcaaagagatacaggagcagtggaaagacggccgccgctggcatctgact
gtagccacagagctcccagagctggaggagaagcagttcagtaaccgtggtaaaaggggc
ttcggcagtggtaaccgtggtgacagaggagggttcagaggcggcaggggccggaatttt
gggggaaacggtggccgtagcaacgggtaccggggtggtggaggtggttatggaaacaac
agaggaggacagaaacgaaccttcagccaagcttttcattactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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