KEGG   Kushneria konosiri: B9G99_06775
Entry
B9G99_06775       CDS       T04839                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
kus  Kushneria konosiri
Pathway
kus03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B9G99_06775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kus03019]
    B9G99_06775
Enzymes [BR:kus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     B9G99_06775
Messenger RNA biogenesis [BR:kus03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     B9G99_06775
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UTP25 P-loop_SecA Herpes_capsid Gag_p24 CMS1 ssDNA-exonuc_C AAA_22
Other DBs
NCBI-ProteinID: ARS52618
UniProt: A0A2Z2H5R4
Position
1448926..1450305
AA seq 459 aa
MSFSQLGLSPELLRALEDAGYQTPSPIQSKAIPACLEGRDVLAAAQTGTGKTAGFTLPIL
ERLSRKPQGHKRPVRALILTPTRELAAQIGESVEKYGVHLKPRLKSDVVYGGVKVNPQIA
RLRDGVDVLVACPGRLLDLVNQKAVRLDQVETLVLDEADRMLDMGFIHDIKKILRLVPKQ
RQNLLFSATFSKEIRELAGTLLNNPVSIDVAPRNTAAESVDQSIYMVEKPQRMALLTHLI
THHQWSQALVFTATKHMANRVTQHLQKAGITAAAIHGNKSQNARTAALSGFKSGEVQVMV
ATDVAARGIDISELPNVVNFELPKTPADYVHRIGRTGRAGASGQAVSLVMPDERGQLKQI
EKLIGRAIPVASAEGFDFSRAVPETPDEREQRPGGGQRRQGSGRNNNGGGARSGAGRSGS
GNRSRSGGGGNGGGNDEQARPARRRRRSSPRAADNSGNR
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtcattttcccaacttgggctgtcgcccgagcttttgcgtgctcttgaagatgctggc
taccagacaccttcccccattcagtcgaaagccattccggcctgccttgaaggtcgcgat
gtgctggcggcggcccagaccggtaccggcaagaccgcaggtttcaccctgccgattctg
gagcgactgtcgcgcaagcctcagggacacaagcgtccggtacgcgccctgatcctgacc
ccgacccgcgaacttgccgcccagatcggcgagtcggtcgaaaaatacggcgttcacctc
aaaccgcgtctgaaaagcgatgtggtctacgggggcgtcaaggtcaatccgcagatcgcg
cgcctgcgcgatggcgtggatgtgctggtggcctgcccgggccgtctgctggatctggtc
aaccaaaaggccgtacggctggatcaggtcgaaaccctggtgctggatgaagccgaccgc
atgctggacatgggctttatccacgacatcaaaaagatcctgcggctggtaccgaagcag
cgtcagaacctgctgttttccgcgaccttctccaaggagatccgagagctcgccggaacg
cttttgaacaacccggtcagcatcgacgtggcgccgcgtaacaccgccgccgaaagcgtc
gaccagtcgatctacatggtcgaaaagccccagcgcatggcgcttttgacccatctgatc
acacaccatcagtggtcgcaggcgctggtctttacggcgaccaagcacatggccaaccgg
gtcacccagcatctgcagaaggctggcatcacggcggcggccattcacggcaacaagagc
cagaatgctcgtaccgcagcactgtccggcttcaagagcggggaagtgcaggtgatggtg
gccaccgatgtggcggcccgcggcatcgatatctccgaactgcccaatgtggtcaacttc
gaactgcccaagacaccggccgactatgtccaccgtatcggtcgtaccggccgtgccggt
gccagtggtcaggccgtgtcgctggtcatgcccgatgagcgtggccagctcaagcagatc
gaaaaactgatcggacgtgccattccggtcgccagcgctgaaggcttcgacttcagccgc
gcggtgccggaaaccccggatgagcgcgagcagcgcccgggtggcggtcagcgtcgtcag
ggcagcgggcgcaataataatggcggcggtgcgcgcagcggtgccggtcgtagtggctca
ggcaatcgctcacgcagcggaggcggcggtaatggcggcggcaacgatgagcaggcccgt
ccggcgcgtcgccgtcgtcgtagcagccctcgcgcggcggacaacagcggtaaccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (27)   

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