KEGG   Lactobacillus amylovorus 30SC: LAC30SC_01250
Entry
LAC30SC_01250     CDS       T01436                                 
Name
(GenBank) ATP-dependent RNA helicase-like protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
lai  Lactobacillus amylovorus 30SC
Pathway
lai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LAC30SC_01250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lai03019]
    LAC30SC_01250
   03009 Ribosome biogenesis [BR:lai03009]
    LAC30SC_01250
Enzymes [BR:lai01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LAC30SC_01250
Messenger RNA biogenesis [BR:lai03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LAC30SC_01250
Ribosome biogenesis [BR:lai03009]
 Prokaryotic type
  rRNA helicases
   LAC30SC_01250
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1
Other DBs
NCBI-ProteinID: ADZ06442
UniProt: F0TID5
Position
261697..263190
AA seq 497 aa
MKFSELGLNDALLKAIKRSGFEEATPIQEQTIPLALAGKDVIGQAQTGTGKTAAFGLPIL
QTIDKKEKAIQAIIIEPTRELAIQTQEELFRLGRDEHTHVQVVYGGADIGRQIRSLKHHV
PSILVGTPGRLLDHLKRGTINLDKVKAVVLDEADEMLDMGFIQDIESILKYAKNRKQTLL
FSATMPKPILRIGEKFMNHPKIVQIKAKELTADLIDQYFVRAKESEKFDIMCRLIDVQGP
DLALVFGRTKRRVDELTRGLQARGYNAAGIHGDLSQARRMAVLKRFREGKLDILVATDVA
ARGLDISGVTHVYNYDIPQDPDSYVHRIGRTGRAGQNGISVTFVTPNEIGYMRTIEQLTQ
KKMSPLRPPTDAQAFRGQLKQAEAEIEDLMNGDLGKYTQEASELLDNYSALDLVAAFLKN
LSKDSTDVKVKITPEKPLPYKGDGRHHRGGRGKGRNNRGHGNGNYHRRNNHNYRHNGNRG
KRGRGNGHEFIIKNKKD
NT seq 1494 nt   +upstreamnt  +downstreamnt
ttgaaattttcagaattaggattaaacgatgcgcttcttaaggcaattaaacgctcaggc
tttgaagaagcaactccaatccaggaacaaactattccacttgctttagcgggcaaggat
gtaattggtcaagcgcaaactggtacaggtaagactgctgcttttggtttgccaatttta
caaactattgataaaaaagaaaaagcaattcaagcgatcattattgaaccaacgcgtgaa
ttggctattcagactcaagaggaattattccgtctaggtcgtgatgaacatacccacgta
caagtagtttatggtggagctgatattggtcgtcaaattcgttctttaaagcaccatgta
ccatcaattttagtaggtactccaggacgtttattggatcacttaaagcgtggcacaatc
aatttggacaaagttaaggctgttgttctagatgaagcagacgaaatgcttgatatgggc
tttattcaagatattgaaagcattttgaagtatgccaagaaccgcaagcaaactttgctc
tttagtgcaacgatgcctaagccaatcttacgtattggcgaaaagttcatgaaccatcct
aaaattgttcaaattaaggctaaggaattaactgcagacttaatcgatcaatactttgtt
cgtgccaaagaatcagaaaaattcgacattatgtgtcgtttaatcgatgttcaaggtcca
gacttggctttggtctttggtcgtactaaacgccgcgtagatgagctgacacgtggcttg
caagctcgtggctataatgcagccggtattcacggtgacttgtcacaagctcgcagaatg
gccgtcttgaagcgattccgtgaaggtaagcttgatattttggtagccactgatgtcgct
gctcgtggacttgatatttcaggtgttactcacgtttataactacgatattccgcaagat
ccagattcttacgttcaccgtattggtagaactggtcgtgccggtcaaaacggaatttca
gtaacttttgtaacgccaaatgaaattggctacatgagaaccatcgaacaattaacccag
aagaagatgtcaccacttcgtccacctacagatgcgcaagctttccgtggtcaattgaag
caagctgaagctgaaatcgaagatttgatgaatggtgatttgggcaagtacacgcaagaa
gctagtgaactgcttgataactactcagcacttgatttggttgcagccttcttgaagaat
ctttctaaagattctactgacgttaaggttaagatcaccccagaaaagccacttccatac
aagggagatggtcgtcaccaccgtggcggtcgcggcaagggacgcaacaatcgtggacat
ggcaatggtaattatcatcgtcgcaacaaccacaactatcgtcataatggcaatcgtggt
aagcgcggtcgtggcaatggtcatgaatttattatcaagaataaaaaagattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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