KEGG   Candidatus Liberibacter americanus: lam_850
Entry
lam_850           CDS       T02902                                 
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lar  Candidatus Liberibacter americanus
Pathway
lar03420  Nucleotide excision repair
lar03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    lam_850 (uvrD)
   03430 Mismatch repair
    lam_850 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lar03400]
    lam_850 (uvrD)
Enzymes [BR:lar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     lam_850 (uvrD)
DNA repair and recombination proteins [BR:lar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     lam_850 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     lam_850 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 DEAD AAA_11 Viral_helicase1 PcrA_UvrD_tudor PhoH DUF6364
Other DBs
NCBI-ProteinID: AHA28189
UniProt: U6B568
Position
972040..974259
AA seq 739 aa
MNNSNNKEDYVKNYSLNNSSDYINRLNTQQKHAVTCIDDNPLLILAGSGTGKTTVLIARM
LYLIDQKKISSSKILAITFTNQAAQNIKDRFISLGYNIPKIKTFHSFCSDLLRKKADLIN
MQPNFTIINGNMSQKIIKEIMKDQGIEPKEHLKYSTERITYWQNNGLSPKEIDRYYKSKN
DEIAIDIYHRYTENLQKHNSIDFGGLIIKSIEVLRNPHILKEYHQYISHVMVDEYQDVNP
SQYMLLRLLYQKEDEKQRIKLCCVGDEDQCIYEWRGSRVDHITHFEKDFKGANIIKLEQN
YRSNYHILNTANKLISHNKNRIGKTLFTERNFPSDQKVKIHVFQESISETSTITKEIQEF
METGIPLNEIAILVRTSLQIKSFEDEFITQKIPYEVIKGRGFYDLREIRNAISYLRLTFN
KNNYHDFMEIINTPKRGIGKESLKKIKEYADQHEISMFKATEAIIKTDKLQNKQIKTLIN
FINDIYRWEKGLKKHSKYNNIAEIILEESGYIEMHRNDVSSIGSEERINNLYELISTVGE
YKLIDQFIEDVSLRENNNRLYQSLDCVKIMTLHAAKGLEFDTVFISGWEQGLFPHQNSID
SEDYEKELEEERRLAYVGITRAKNNCHLCYVINPRNHFYNNNFGHKNEPSQFLLEMYNPD
HVQDIMYDDIFCSFNEYWENSFLESNILYKYYSKFNPGDLVRHEKFGTGKIIHVLDNKSD
IEFDNNHRKLIYNNFIKKL
NT seq 2220 nt   +upstreamnt  +downstreamnt
gtgaataatagcaataataaagaagattatgtgaaaaactatagcctaaataatagtagt
gattatattaatcgattaaatacacaacaaaagcatgctgtcacctgtattgacgataat
ccactattaatattagctggatcaggaactggcaaaactacagttttaattgcacgcatg
ctctatttgatagaccaaaaaaaaatatcttcatcaaaaatacttgctattacttttact
aatcaagcagcacaaaatataaaagatagatttattagcttgggatataatatacctaaa
ataaaaacttttcattcattttgttcagacttgttacgtaaaaaagcagatcttataaat
atgcagcctaattttactattattaacggcaatatgtctcaaaaaattataaaagagatc
atgaaagatcagggaatagagccgaaagagcatcttaaatattccactgaaagaataact
tattggcaaaataatggattaagtccaaaagaaattgacagatattacaaaagtaaaaat
gatgaaatagctattgatatttatcatcgttatacagaaaatctacaaaaacacaatagt
atagattttggaggattaattataaaaagcatagaagtgctacgtaatccgcatatttta
aaggaatatcatcaatatatttcacatgtcatggtagatgaatatcaagatgtaaatcct
tcacaatatatgttattacgattattgtaccaaaaagaagacgaaaaacaaagaattaaa
ttatgctgtgttggcgatgaagaccaatgtatttatgaatggcgtggctcaagagttgat
catatcacacattttgaaaaagattttaaaggggctaatataataaaacttgagcaaaat
tatcgatcaaattatcatattctaaataccgcgaataaattgatttctcacaataaaaat
cgcattggaaaaacactatttacagaaagaaattttccaagcgatcaaaaagtcaaaata
catgtgttccaagaaagtatttcagaaacatctactataactaaagaaattcaagaattc
atggaaacaggaattcctttaaatgagatagcaattttagttcgtacatcattacaaata
aaaagtttcgaagatgaatttataacacaaaaaattccatatgaagtaataaaaggaaga
ggcttttatgaccttcgagaaataagaaatgccatctcttatttacgattaacatttaat
aagaataactatcatgattttatggaaataattaacactcctaaaagaggaataggaaaa
gagagcttaaaaaaaattaaagaatatgctgatcaacatgaaatatcaatgttcaaggct
acagaagcaataattaaaaccgataaattacaaaacaaacaaatcaaaacactaataaat
tttataaacgatatttaccgttgggaaaaaggattaaaaaaacactcaaaatataataat
attgccgaaataattcttgaagaaagtggatatattgagatgcatagaaatgatgtatct
tcaataggatcagaagaaaggattaataacttatacgaattaatttccactgtaggagaa
tataaattaatagatcaatttattgaagatgtatctttgagagaaaataataatcgatta
tatcaatccctcgattgtgtaaaaataatgactctacatgctgcaaaaggtctagaattt
gacacagtatttatctcaggatgggaacaaggccttttccctcatcaaaattccattgat
tcagaagattatgaaaaggaattggaagaagagagaagactagcatatgtagggattact
cgggcaaaaaataattgtcatctttgttatgtaatcaatccaagaaatcacttttataat
aataattttggtcataagaacgaaccatctcaatttttgttagaaatgtataatcccgat
catgttcaagacataatgtatgacgatattttctgtagtttcaatgaatattgggagaat
tcgtttctagaaagtaatattttatataaatattatagtaaatttaatcccggcgatctg
gtaagacatgaaaaatttggaactggcaaaattatccatgttttagataataaatcagac
attgaatttgataataatcatcgaaagttaatatataacaactttataaaaaaattataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (22)   

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