KEGG   Lates calcarifer (barramundi perch): 108880774
Entry
108880774         CDS       T04895                                 
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04010  MAPK signaling pathway
lcf04145  Phagosome
lcf04148  Efferocytosis
lcf04310  Wnt signaling pathway
lcf04370  VEGF signaling pathway
lcf04510  Focal adhesion
lcf04520  Adherens junction
lcf04530  Tight junction
lcf04620  Toll-like receptor signaling pathway
lcf04810  Regulation of actin cytoskeleton
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108880774
   04310 Wnt signaling pathway
    108880774
   04370 VEGF signaling pathway
    108880774
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108880774
   04148 Efferocytosis
    108880774
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108880774
   04520 Adherens junction
    108880774
   04530 Tight junction
    108880774
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    108880774
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    108880774
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108880774
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108880774
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108880774
   04031 GTP-binding proteins [BR:lcf04031]
    108880774
Membrane trafficking [BR:lcf04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    108880774
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    108880774
  Macropinocytosis
   Ras GTPases
    108880774
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    108880774
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108880774
  Exosomal proteins of other body fluids (saliva and urine)
   108880774
  Exosomal proteins of colorectal cancer cells
   108880774
  Exosomal proteins of bladder cancer cells
   108880774
GTP-binding proteins [BR:lcf04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    108880774
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU CagD
Other DBs
NCBI-GeneID: 108880774
NCBI-ProteinID: XP_018527992
UniProt: A0A4W6CRU2
Position
LG23:4706031..4711330
AA seq 192 aa
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLSPIIYPQGLAMAKEISAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PIKKRKRKCKIL
NT seq 579 nt   +upstreamnt  +downstreamnt
atgcaggccattaagtgtgtggtagtgggggacggggctgtgggtaaaacatgcctcctc
atcagctacactaccaatgccttccctggagagtacatccccacagtctttgacaactac
tctgccaatgtgatggttgatgggaaaccagtgaacctgggtctgtgggatacagcagga
caggaggactacgacaggcttaggccactgtcctacccacagacagacgtgttcctgatt
tgcttttcacttgtcagtccagcctcctttgagaacgtccgtgccaagtggtatcctgag
gtgagacaccactgccccaacacacccatcatcctggtgggcaccaaactggacttgaga
gatgacaaggacaccatcgaaaagctcaaggaaaagaaactctcccccatcatctacccc
cagggcctggccatggctaaagaaataagtgccgtgaagtatttggagtgctcagctttg
acgcagcgcggccttaagacggtgtttgatgaagccatcagggcggtcctgtgccccccg
cccatcaagaagaggaaaaggaagtgcaaaatattgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (51)   

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