KEGG   Larimichthys crocea (large yellow croaker): 104933341
Entry
104933341         CDS       T04659                                 
Name
(RefSeq) putative helicase mov-10-B.1
  KO
K18422  helicase MOV-10 [EC:5.6.2.5]
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lco03019]
    104933341
   03036 Chromosome and associated proteins [BR:lco03036]
    104933341
Enzymes [BR:lco01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.5  RNA 5'-3' helicase
     104933341
Messenger RNA biogenesis [BR:lco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104933341
Chromosome and associated proteins [BR:lco03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     104933341
SSDB
Motif
Pfam: AAA_12 AAA_11 MOV-10_Ig-like AAA_30 AAA_19 ResIII UvrD-helicase Mov-10_helical MOV-10_beta-barrel Helicase_RecD AAA_22 AAA_16 UvrD_C DEAD PhoH AAA_7 PIF1 SLFN-g3_helicase DUF3536 ATPase_2 AAA T2SSE MYCBPAP
Other DBs
NCBI-GeneID: 104933341
NCBI-ProteinID: XP_010747063
Position
XV:15380815..15390834
AA seq 863 aa
MPAVRPVRTRGPGKSGHLNGPRNTVNDEEQMAQQNLQQIGAHFKMATLFQQYRTQLIPNM
YDITITSDPVSTDEKICLTVSENKTVVPFTVKNSGVTTVYLTFWTSDLIKNIFTVKDYHE
NIVKTVKRHVLAPGDTYKIKVHFYSDHAGVYEKLLMFKFETCQQSSNKFQIMRLLEVTHR
TLVSEEPCPKDTDSSCDLKIPSGCPLVLLKFVVPLNDYPLPRHMKNKYKSLEKPLDLKNY
SKKFGLLLHLEEHQLKKEFKKFNRDNVPLCRHEKNPNIFIMQISDGCTESPIRLSNNDAH
VFFLNQLGGSKNTLYKGYVLHADPKQVYMHFDECFTYRFKDDMRFRVNFVVNRTTLRMQH
RAAGQFSKEKLKDVLFPTEKPSSHHSPVHRLSKLKVNTEQRIAIQHIVDASAKPAPYVVF
GPPGTGKTMTLVNAIKQIVETQASCKILVCAPTNSATDHLFEKLLEKFKNKFEEYQAYRL
YALSASLTNIPQKIEWNCNLNHEKLTFLIPPKRELMKYKIMVTTLFTAGRLVSGGIPPGH
YTYIFVDEAGQATEPQCIIPIAGLMDPQMCQVVLAGDPKQLGPVIASKEAEQNGLGVSLL
ERLMSNNSLYKSHETHGFNNHYVTKLLRNYRSHPAILKIPNELFYEGELQNYVQKEKSDL
FCKWECLPKEDFPLIFHGVSGINEREDQCPSFFNMAEVEVLIDYLKALINHLHKNNRKEI
KPKEIGIIAPYRKQVEKIQNALLTDKDLKKENLKNVLVGSVEQFQGREYNVILMSTVRSA
PKLTSQNQRFTLGFVDNEKRFNVAMTRAQALLIVVGDPRVLKTDEVWNKFIHYCYKEGGY
RGITVSDEEEDTLTVNSPYLCEE
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgcctgcagtacggcctgtccggaccagaggaccaggaaaatctggtcacctgaatggg
ccacgaaatacagtcaatgatgaagaacagatggctcagcagaacctccaacagattgga
gcccattttaaaatggcaacgttattccagcaatacaggactcagctaatccccaatatg
tatgatatcacaatcacctcagaccctgtgtcaacagacgagaagatctgcctcactgtg
tccgaaaacaagacagttgtgccattcactgtgaagaactctggtgtcacaacggtttat
ttaactttttggacttctgacctcataaagaacattttcactgtgaaagactatcacgaa
aacattgtcaagactgtcaagcgacatgttcttgcaccaggagacacatataaaattaag
gtccatttctactctgaccacgctggcgtctatgaaaagttattgatgtttaagtttgaa
acatgccagcagtcctcaaataagtttcagataatgcgcctcttggaagtcacacatcgg
acattggttagtgaagagccctgccccaaagacacagactcatcgtgtgacctgaagatc
cccagtggatgtcctctggtactccttaagtttgtggtgcctttgaatgattatccgctg
cccagacatatgaaaaacaagtacaagtcattggagaaacctctggacttgaaaaactat
tccaagaagttcggcttgctgcttcatctcgaggagcaccagctgaagaaagagttcaag
aaattcaaccgggataatgtgcccttgtgcagacacgaaaaaaacccaaacattttcatt
atgcagatttcagatggctgtacagaatcacccataaggctgtccaacaacgacgcacat
gtcttttttttaaaccagttaggaggtagtaaaaatacactatacaaaggctacgtcctg
catgcggatccgaagcaggtctacatgcatttcgatgaatgtttcacctatcgttttaag
gacgatatgaggttcagggttaactttgtcgtcaaccgtacaaccctgcgtatgcagcat
agagcagcagggcagttttctaaggagaaactgaaggatgtgctcttccctactgaaaaa
ccttcctctcaccattcacctgtacacaggctgtcaaagctcaaggtcaacacagagcag
cgcattgccattcaacacattgtagatgcttctgcaaaacctgccccttatgtagtattc
ggtccacctggtacaggaaaaacaatgactttggtgaatgccatcaagcagatagtggaa
actcaggcatcgtgcaaaatcctggtttgcgctcctaccaacagtgcaactgatcatctc
tttgagaagcttctcgaaaaattcaagaacaaatttgaagaataccaggcgtatcgcttg
tacgccctgagcgcgtctctgacaaatattccccaaaagatagagtggaactgcaacctg
aaccatgaaaaactaacatttttaattccccctaaacgggagctgatgaaatataagatc
atggtcaccactctgtttactgcgggcaggctggtgtcaggagggattccaccaggtcat
tacacttatatctttgtggatgaggcaggccaggctacagaaccacagtgtatcatcccc
atagcaggcttaatggacccacagatgtgccaggtagtgctagctggagaccctaaacaa
ttaggccccgtcattgcatccaaagaagcagagcaaaatggcttgggtgtgtcgctgttg
gagcgtctgatgagcaacaacagcctttacaagtcacatgagacacacggcttcaacaat
cactatgtcaccaagttactcaggaactacaggtcccaccctgcgattctgaaaattccc
aatgagctcttttatgaaggagaacttcagaattatgttcaaaaagagaagtccgattta
ttctgcaaatgggaatgcctgcccaaggaagatttccctttgatcttccatggagtgtca
ggtattaatgaacgcgaggatcagtgtccctcttttttcaacatggcagaggtggaggtg
ttgatagattacctaaaagcccttattaaccatcttcacaaaaataatagaaaggaaatt
aaaccaaaggaaattggcatcattgctccgtacagaaaacaagtggagaaaatccagaat
gcccttctaactgacaaagatctcaagaaggaaaacctgaaaaacgtattggttggctca
gtggagcagtttcagggtagagagtacaacgtgattctaatgtctacagtgcgcagcgcc
ccaaaactgacttcgcagaatcaacgattcactctaggctttgttgataacgagaagagg
ttcaacgtggcaatgacccgagcacaagccttactgattgtggttggagacccgagagtt
ttgaaaacagacgaagtctggaacaaatttatccattactgctacaaagaagggggttac
cgaggcattactgtctctgatgaagaggaagatacgctgactgtaaactcgccgtacctc
tgtgaagagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (23)   
   Pfam (23)   
All databases (64)   

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