KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_218616
Entry
LOTGIDRAFT_218616 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03250  Viral life cycle - HIV-1
lgi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    LOTGIDRAFT_218616
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    LOTGIDRAFT_218616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lgi04131]
    LOTGIDRAFT_218616
   03400 DNA repair and recombination proteins [BR:lgi03400]
    LOTGIDRAFT_218616
Membrane trafficking [BR:lgi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    LOTGIDRAFT_218616
DNA repair and recombination proteins [BR:lgi03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    LOTGIDRAFT_218616
SSDB
Motif
Pfam: AAA Vps4_C RuvB_N AAA_5 AAA_22 AAA_16 NACHT RNA_helicase KAP_NTPase AAA_2 AAA_lid_3 AAA_14 AAA_24 TIP49 AAA_18 Parvo_NS1 DUF815 ATPase_2 nSTAND3 AAA_17 Viral_helicase1 AAA_28 AAA_33 AAA_25 AAA_7 Mg_chelatase ATP-synt_ab DUF5906 IstB_IS21 bpMoxR Sigma54_activat AAA_3 KTI12 NTPase_1 MCM ABC_tran Bac_DnaA NB-ARC Cytidylate_kin AAA_19 DAP3 Guanylate_kin AAA_11
Other DBs
NCBI-GeneID: 20246794
NCBI-ProteinID: XP_009059576
JGI: 218616
UniProt: V4BLU8
Position
Unknown
AA seq 286 aa
MPFIYPHLFTGGRKPWKRILLYGPPGTGKSRLAQAIASEIQSTFYCVSSADLVSSWVGES
EKLIKELFSHATNNTGRSVIFIDEIDSITRQRSAREEEHTRRIKTELLKQMEGADTSDSS
NKIFLLCATNCPWELDVAFLRRFQKRIYIPLPEREARHQLLKLHSQDNSVNLTDEEWNNL
VDCTDGYSGSDIATMTLGALFEPIRDLQSAQYWNMLPDGKYQPADILYSNSVEAFLTDLP
ADKVSHLFLYVKKGDFIKSLHTHRKTVSEEELKKFEIFTKSYGESG
NT seq 861 nt   +upstreamnt  +downstreamnt
atgccttttatatatcctcatctatttacaggaggaagaaaaccatggaagcgaatttta
ttgtacggacctccaggaactggaaaatcaagactagcacaagccatagcctcagagatc
cagtctaccttttattgtgtttctagtgctgacttggtttccagttgggttggagagagt
gaaaaattgattaaagaactgttttcacatgctactaataacacaggaagatctgtaata
tttattgatgaaatagacagtataactcgacagcgtagtgctagagaagaagaacataca
cgaagaataaaaacagaattattaaaacaaatggaaggagcggatacttcagattcatct
aataaaatatttttattatgtgctacaaactgtccatgggaattagatgttgccttttta
cgtagatttcaaaagagaatttatattccacttcccgaaagagaggcaagacatcagtta
ttgaagttacacagtcaagataattcagtgaatttaacagatgaagaatggaataatcta
gtagactgtacagatggttattctggaagtgatatagcaaccatgactctaggtgcttta
tttgaaccaattagagatctacagagtgcacaatattggaacatgttaccagacggtaaa
tatcagccagcagatattttatattctaatagtgtagaggcttttttaactgatttacca
gctgataaagtaagtcacctttttttatatgtaaaaaagggagatttcataaaatcatta
cacacccacagaaaaactgtatcagaagaagaattgaaaaagtttgaaatttttactaaa
agttatggtgaaagtggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (43)   
   Pfam (43)   
All databases (64)   

Download RDF
DBGET integrated database retrieval system