KEGG   Linepithema humile (Argentine ant): 105673553
Entry
105673553         CDS       T04898                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu03250  Viral life cycle - HIV-1
lhu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    105673553
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105673553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lhu04131]
    105673553
   03400 DNA repair and recombination proteins [BR:lhu03400]
    105673553
Membrane trafficking [BR:lhu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    105673553
DNA repair and recombination proteins [BR:lhu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    105673553
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 TIP49 AAA_16 AAA_14 AAA_5 AAA_22 IstB_IS21 RuvB_N AAA_2 AAA_18 DUF815 AAA_25 nSTAND3 AAA_33 AAA_24 RNA_helicase AAA_17 TniB PhoH ResIII NACHT Mg_chelatase AAA_7 DUF5906 KAP_NTPase AAA_28 bpMoxR Parvo_NS1 Sigma54_activ_2 Viral_helicase1 Sigma54_activat AAA_29
Other DBs
NCBI-GeneID: 105673553
NCBI-ProteinID: XP_012224698
Position
Unknown
AA seq 440 aa
MASGILQKAIELVTKATEEDRNKNYEEALRLYEHAVEYFLHSIKYETHGDRAKESIRAKC
VQYLERAEKLKAYLKKSKKKPVKAGEDNSKSEDKKSDSGDSDTDSDPEKKKLQSKLEGAI
IIEKPDVKWNDVAGLDGAKEALKEAVILPIRFPHLFTGKRIPWKGILLFGPPGTGKSYLA
KAVATEANNSTFFSVSSSDLVSKWLGESEKLVKNLFELARQHKPSIIFIDEIDSLCSSRS
DNESESARRIKTEFLVQMQGVGSDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEEQ
ARAVMFKIHLGNTSHCLTEEDFRKLAASTEGYSGADISIIVRDALMQPVRQVQTATHFKR
VKGPSPKDPSIIVDDLLTPCSPGDPAAIEMSWMEVEGDKLYEPPVTMKDMLKSLATTRPT
VNEEDMTKLEKFKEDFGQEG
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggcttcgggaatattgcagaaagctatagaacttgtgacaaaggccacagaggaggat
cgtaataagaactatgaagaagctctgaggttatacgagcatgctgttgaatacttccta
cattcgatcaaatacgagacacatggagacagagcaaaggaaagcataagagcaaaatgt
gtgcagtatttagagagagccgaaaaattaaaggcttatttgaagaagagtaagaagaag
ccggttaaagctggagaagataattctaagagtgaagataagaaaagcgacagtggtgac
agtgatacagatagtgatcctgaaaagaaaaaattacagagcaaattggaaggagctata
atcatcgagaagccagatgtcaaatggaatgatgtggctggtcttgacggagccaaagaa
gctttgaaggaagcagttattttaccaattcgttttcctcatctttttactggaaaacgt
ataccttggaagggtatcctattatttgggccaccaggtactggtaaatcatatttggca
aaggcagtagcgacagaagccaacaactctactttcttctctgtatcatcgtcggattta
gtaagcaagtggttaggagagtcggaaaaacttgtaaaaaatttgttcgaactagcacga
caacacaaacctagcattatatttattgatgaaatagattcactttgctcgtcacgttcc
gacaatgaatcagaatccgcaagaaggataaaaacagaatttctagttcagatgcaaggt
gtaggatccgataacgatggtatacttgtgctgggtgcaaccaacataccttgggtcctg
gattctgcgatcagacgacgattcgaaaagaggatttacattccattgcccgaggaacaa
gcacgggctgtcatgtttaagattcacttgggcaacacatcgcattgtttgacggaagaa
gattttaggaaattagcggcctctaccgaaggttactctggggctgatataagcattatt
gtacgagatgctctaatgcagccagtccgacaagtgcaaacggctacgcactttaagcgc
gttaaagggccgtcaccgaaggatccttccattatcgttgatgatttactcactccatgc
tcccctggtgatccagctgctatagaaatgagttggatggaagtagagggtgataaatta
tacgagccaccagttaccatgaaagatatgttgaaatcgctagcaacgacccgtcctaca
gtgaacgaggaggatatgacaaagttagagaaatttaaggaagatttcggtcaagagggt
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (35)   
   Pfam (35)   
All databases (49)   

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