KEGG   Listeria innocua (serotype 6a): clpC
Entry
clpC              CDS       T00067                                 
Name
(GenBank) endopeptidase Clp ATP-binding chain C
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lin  Listeria innocua (serotype 6a)
Brite
KEGG Orthology (KO) [BR:lin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lin03110]
    clpC
Chaperones and folding catalysts [BR:lin03110]
 Heat shock proteins
  HSP100
   clpC
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 Clp_N ClpB_D2-small AAA AAA_5 Sigma54_activat AAA_16 AAA_22 IstB_IS21 nSTAND3 UVR RuvB_N AAA_14 AAA_18 TniB ATPase_2 Zeta_toxin AAA_28 Mg_chelatase bpMoxR AAA_7 Torsin Roc TIP49 NACHT AAA_3 AAA_25 AAA_24 DNA_pol3_delta2 ABC_tran Sigma54_activ_2
Other DBs
NCBI-ProteinID: CAC95497
Pasteur: LIN00264
UniProt: Q92F43
Position
273655..276117
AA seq 820 aa
MMFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEGIAAKALYELGISSEKV
QQEVEGLIGHGEKAVTTIQYTPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVA
ARVLSNLGISLNKARQQVLQLLGGGDATGAGRQTNTQATPTLDSLARDLTVIAREENLDP
VIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMT
LDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILK
PPLARGELQCIGATTLDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHGLRDRYEAH
HRVAITDEALEAAVRLSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLS
ELKKEKDAAVQGQEFEKAAALRDKEQKLKKSLEETKANWQEKQGLDHSEVTEDIVAEVVA
SWTGIPVAKLAETETNKLLNMEKLLHERVIGQDAAVKAVSLAVRRARAGLKDPKRPIGSF
IFLGPTGVGKTELARALAESMFGDEDSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQ
LTEKVRQKPYSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIG
AQEMKQDKSMGFNVIDPLKDHKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQ
IVTLLTSQLTKRLAERDIHVKLTEGAKAKIAKDGYDPEYGARPLKRAIQKEVEDMLSEEL
LRGNIKVGDNVEIGVKDGKLEVRKKAATKKKAAPKKVKSK
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgatgtttggacggtttacgcaaagagctcagaaagtactcgcgttgtcacaagaagag
gcgatgcgtttgaatcatagtaatttaggaacagaacatatacttctaggccttgtaaga
gaaggcgaaggaattgcggcgaaagctctctatgaacttgggattagttctgaaaaagtg
cagcaagaggtggaaggcttaattggtcatggggaaaaagctgtgacaacgattcaatat
actcctcgcgcgaaaaaagtaattgaactttcgatggatgaggctaggaaactagggcat
acttacgttggaacagaacatatcttacttgggcttattcgtgaaggagagggcgttgca
gctcgcgttttaagtaacctaggtattagtttaaataaagcgcgtcaacaagttttacag
cttcttggtggcggagatgctacaggtgctggtcgacaaacaaatacgcaggcgacacca
actttagatagtttggcacgtgatttaacggttattgctcgggaagagaatttggatcca
gtgattggtcgttctaaggaaattcaacgtgtgattgaggtgcttagtcgtcggacaaaa
aataacccagttcttattggtgaacctggtgttggtaaaacagccattgcagaaggtctg
gcgcagcaaattgtccgcaatgaagtacctgaaaccttacgcggaaaacgtgttatgacg
cttgatatggggactgttgtagcaggtacaaaatatcgtggtgaatttgaagaccgtttg
aaaaaagtaatggatgaaattcgtcaagctggtaatgttattctatttattgacgaactg
catacgttaattggcgctggtggggcggaaggtgcgattgatgcatccaatattttgaag
ccacctctagctcgtggtgaattgcaatgtattggtgcaacaaccttagatgaatatcgc
aaatacattgaaaaagatgcagcgcttgaaagacgtttccaaccgattaaagttgatgaa
ccgactgtagaagagtctatccaaattttacatgggttgcgtgatcgttatgaagcgcat
caccgagttgcgattacggatgaagctcttgaggctgctgttcgtttatctgatcgctat
atttcagaccgtttcttacctgataaagcgattgatgttattgatgaatctggatcaaaa
gttcgtttaaaatcttttacaactccaaaaaatgtaaaagaaatggaaaacaatttatcc
gaattgaaaaaagaaaaagatgccgctgtacaagggcaagagtttgaaaaagcagcagca
ttacgtgataaagaacagaaactcaagaaatcattagaagaaacaaaagcaaactggcaa
gagaagcaaggtcttgatcatagtgaagtaacagaagatattgttgcagaagtagttgct
agttggactggaattccggttgctaaactggctgaaacggaaacaaacaaacttcttaat
atggaaaaacttttacatgagcgagttattggccaagatgcagcggtaaaagccgtatca
ctcgctgttcgccgagctcgtgcagggcttaaagatccgaaacgtccgattggctccttc
attttccttggtcctactggggttgggaaaacggaacttgcacgtgcacttgctgagtcc
atgtttggtgatgaagattcaatgattcggattgatatgtccgagtacatggagaaattc
tcaactgctcgtttagttggggctcctccaggttatgttggttatgaagaaggcggtcaa
ctgacagaaaaagttcgtcaaaaaccttattctgtagtgcttcttgatgaaattgaaaaa
gcgcatcctgatgtatttaatatgttgttacaagtgcttgatgatggtcgtttaactgat
tctaaaggtcgcgtggttgattttagaaatacagttattattatgacttctaatatcggt
gctcaagaaatgaaacaagataaatccatgggctttaatgtgattgatccacttaaagat
cataaagcaatggaacatcgtgttttacaagatttaaaacaagctttccgcccagaattt
attaaccggattgacgaaacaattgtattccattctctacaagaaaaagaattgaaacaa
attgttacgcttctgacttctcaattaactaaacgcctagctgaacgtgatattcatgtg
aaattaacagaaggtgcaaaagctaaaattgccaaagatggttatgacccagaatacggg
gcgcgtcctttgaaacgagcaattcaaaaagaagtagaagatatgctttctgaagaatta
cttcgtggcaatatcaaggtaggcgataacgttgaaattggtgtgaaagacggaaaatta
gaagttaggaaaaaagcagcgactaaaaagaaagctgctcccaaaaaagtaaaatcgaaa
taa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   PASTEUR (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (32)   
   Pfam (32)   
All databases (40)   

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