KEGG   Secundilactobacillus paracollinoides: AYR62_14400
Entry
AYR62_14400       CDS       T04675                                 
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
lpd  Secundilactobacillus paracollinoides
Brite
KEGG Orthology (KO) [BR:lpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpd03400]
    AYR62_14400
Enzymes [BR:lpd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AYR62_14400
DNA repair and recombination proteins [BR:lpd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     AYR62_14400
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 Viral_helicase1 AAA_12 DEAD ResIII DUF6368 AvrB_AvrC DUF4372
Other DBs
NCBI-ProteinID: ANZ65154
UniProt: A0A1B2IX61
Position
3211930..3215619
AA seq 1229 aa
MDYTKSQQAVLDTHHTNLLVSASAGSGKTRVLVDRVINMILDHESIDHLLIVTFTRAAAK
EMKDRIESALKQQINQVDAEERRYLTRQLALLPVAAISTMDAFCQQIVERYYYLINLDPV
FRILGDASESALLKEEVWDDVREDLYANDEDGKFQELVTNFSSDRSDDGLTTVVDDVFRF
MGAKPDPDDWLAHLGDNYAVDQDLMTAPIVKTRLLPIIQDKLASAKSELTAAKRLAADEQ
VDQVVTYMDSLLAQLDELHSDATSWDAFRAQVEAFDWGRLPSIRKTNEAYDGYQLVKDQV
ASHKKAAKEDQLDEILSFMPQDEIVTIATMHHSEQIVRQLATVVQTFSDAYAKEKRRRHV
LEFSDVEHFALQILEAQTDEAKAVRQQLQTDYHEIMVDEYQDTNELQEAIVTSLAQDDPG
NLFMVGDIKQSIYRFRLAEPQLFLTKFQRYQADPTAGKEITLAENFRSMANVDNFTNLIF
TQIMDEKLGQISYSGSAKLVYGASYPTSLPNAASLLIYETEAPTEKAPGDVPDKDAGQVT
VVAQQIAELMHDQTTIWDRRAQAMRPLTYQDIAIIAPTKTNNLEIQDQFGRLGIPVQIND
AQSYFKTTEIQIMMSLLQLIDNPYQDIPLAAVLRSPIVGLNENELAFLRITDKTDDYFSA
LQHFLINYEADYAGQAYADSLQPKVAHFIEQLTTFQTIARKQPLATLIWQIYQQTGFLDY
VAGMPAGVQRQANLHALYERAADYERNGFKGLFQFVRFIERMQNNDQDLAEAAAETTDNA
VQVMTIHGSKGLEFPVVFLLDTSRNFNMQDTTERALLNNQLGIGIDDFQPDTRLVVPSIP
KMVIKETTKQESLAEEMRKLYVALTRAEQRLYIVGACKQQADLLKTWQAAAQDQQLVLNP
TLRGKTHNYLDWIGMSLVRHPKFQATDAQPLQALADDPTDFDITFITPDRLTEMAAYQKP
ITGSTWLTDLKEQLKTTDFASVDVDQIDQVLDMQYGFEPEMRTTAYQSVSEIKRLFEDPD
MLQLGQYNPQWQQSHGNRFVTSDFKQPAFLQTVTAPTSAEVGTATHLVLQELSLTQPITL
AAIDQQIQTLVADQVMAEPIAAQIDREHVLRLFDTELGQAIVAHGTRTQRETPFSLLLPA
HQVFEDLHDEQAKILIHGIIDGYFEDEDGITLFDYKTDHVAPGESGIAKIKDRYSGQLNL
YAQALSDMTGKPVVRKYLFLLATGEAVAM
NT seq 3690 nt   +upstreamnt  +downstreamnt
gtggactacactaaaagccaacaagcggtacttgacacccaccacacgaatctgctggtt
tcggcatcggccggttccggtaaaacgcgggtgcttgtggaccgcgtcattaacatgatc
cttgatcacgaaagtatcgatcatttgctgattgtcacctttactcgagcggcggctaaa
gaaatgaaggatcgaatcgaatcggcattaaaacaacagatcaaccaggtcgacgctgaa
gaacgccggtatctcacccgtcaactggcacttttaccagtggcggccatcagtaccatg
gatgcattttgtcagcagatcgttgagcgttattactacctgatcaatttagatccggtc
tttcgaattcttggtgatgcttcagaaagtgcattgttaaaagaagaagtctgggacgac
gttcgtgaagacctgtatgccaacgatgaggacggcaagtttcaagaactggtgacgaat
ttttccagcgaccgttctgacgatgggctaacgacagtcgttgacgacgtttttcggttc
atgggtgctaaaccggatcctgatgactggttagctcatcttggcgacaactatgcggtc
gatcaggacctcatgacagcaccaatcgttaaaacacggctgttgccaattattcaagac
aagctggcaagcgctaaatcagagctgacggctgctaaaagattagccgcggatgagcag
gttgaccaagtcgtgacctacatggacagcttgttggcacaactggatgagctgcactca
gatgcaacgtcttgggatgcgtttcgtgcccaggttgaagcattcgactggggccggttg
ccgagtattcgaaaaacaaatgaggcttacgacgggtaccagctcgttaaagatcaggtt
gccagccataagaaagcggctaaggaagatcagttggatgagatcttatcgttcatgccg
caggatgagattgtgacgattgcgacgatgcaccatagtgagcagatcgtccgccagttg
gcaacggtcgttcagacgtttagcgacgcctatgccaaagaaaaacgccggcgtcatgtc
ctagagtttagcgatgttgaacactttgcactgcagatcttggaagctcaaacagatgag
gccaaagcggttcgtcagcaattgcaaacggactaccacgaaatcatggttgatgagtat
caggacaccaatgaattgcaggaagctatcgtgacgtctcttgctcaggatgaccccggg
aacctcttcatggtgggcgatatcaaacaatccatttaccgtttccgattagcggaaccg
caactgtttttaacaaagttccagcgctatcaggccgacccgacagccggtaaggagatc
acgttggcggaaaatttccggtccatggcaaacgtggacaattttacgaacctgatcttt
acccagatcatggatgaaaaactcggtcaaatcagctatagcggctctgctaaactcgtg
tacggcgcatcatatccgacgagtttgccgaacgcggcatcactgctgatatacgaaact
gaggcaccgacggaaaaggcacctggtgacgtacctgataaggacgctggccaggtcacc
gttgtcgcccagcagattgctgaattaatgcatgatcaaacgactatctgggatcggcgg
gcacaagccatgcgcccactgacctaccaagacattgcgattattgcaccgacaaaaaca
aacaatttggagattcaagaccagtttggccgacttgggattcctgtccagatcaatgac
gcccagagttactttaaaaccactgagattcagatcatgatgtcgctgttgcagctgatc
gataacccttaccaggatattccactggcagcagtgttacggtcacccatcgttggcttg
aacgaaaatgagttggccttcctcagaattaccgataagacggacgattatttctcagcc
ttgcaacactttttgattaactacgaagccgattatgcggggcaggcatacgctgacagt
ctgcaacctaaagtcgcccattttattgaacagctgacgacgtttcagacaattgcgcgc
aagcagcccttggcgaccctcatttggcagatctatcagcagaccggttttctggactac
gttgctgggatgccagctggggtacagcgacaagctaatctgcacgccctgtatgaacgg
gcggccgactatgagcgcaacggatttaaaggactctttcaattcgttcggttcattgag
cggatgcaaaacaacgatcaggacctggcagaagcggcagcggagaccaccgataacgct
gtccaggttatgacgatccacgggagcaaaggtcttgaattcccagtggtctttctcctc
gacacgtcacgcaatttcaacatgcaggacactacggaacgcgcactgttaaataaccaa
ctgggtatcgggatcgatgattttcagccagatacgcgactggtggtgccgtccattcct
aaaatggtgatcaaagaaacaactaagcaggaatcactcgcggaggaaatgcggaaactg
tacgtggcgctgacccgggctgagcagcggttgtacattgttggcgcctgcaaacaacag
gctgatttattaaagacctggcaggcggccgcccaggaccagcagctggtcttgaaccca
acactgcgggggaagacgcataactatttggactggatcgggatgtcgctggttcgccac
cctaagtttcaggcgactgatgcacaaccgcttcaggcactggctgacgatccaactgac
tttgatatcacgtttatcaccccggatagactgactgaaatggcagcctaccaaaagccg
attactggcagtacctggctaactgatttaaaagaacaactgaaaaccaccgattttgcg
agtgtggacgtcgaccagatcgaccaggttttggacatgcagtatgggtttgaaccagag
atgcggacgacggcgtaccagtcagtttcagaaattaaacgcctctttgaagatcccgat
atgttgcaattagggcagtataacccccagtggcagcaatcacacgggaaccggttcgtg
acgagtgactttaaacagccagcctttctgcagacggtgacggcgcctacttcggctgaa
gtggggacagcgacccatttggttttgcaggaattatcgttgacacagcccattacgttg
gcggccattgaccagcaaattcaaaccttagttgctgatcaggtgatggccgaaccgatt
gcggcacaaattgaccgtgagcatgtgttgcggctgtttgataccgagttgggacaagca
atcgtcgcccatggcactcggacgcagcgagaaacaccgttttcactactgctacctgct
caccaagtctttgaggatctgcacgatgagcaggctaaaatcctgattcatgggatcatt
gacgggtatttcgaagatgaagacgggattacgctgtttgactataagacggatcacgtg
gccccaggtgaaagcggtattgcgaagatcaaggatcgctattcaggtcagctaaattta
tacgcgcaggccttgtcggatatgacgggcaagccggtggtcagaaagtacctgttcttg
ctggcgacgggagaagcggtggcgatgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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