KEGG   Lonchura striata domestica (Bengalese finch): 110468059
Entry
110468059         CDS       T05897                                 
Symbol
ABCC8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
  KO
K05032  ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Pathway
lsr02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    110468059 (ABCC8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lsr02000]
    110468059 (ABCC8)
Transporters [BR:lsr02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC8, 9 subgroups
    110468059 (ABCC8)
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_29 RsgA_GTPase MMR_HSR1 AAA_25 nSTAND1 DEAD AAA_7 Dynamin_N TraD_N
Other DBs
NCBI-GeneID: 110468059
NCBI-ProteinID: XP_021381295
Position
5:48785050..48859157
AA seq 1601 aa
MCAEAEAAPGCAQGPAMALAFCGDEGNSTAYNVDHGVLNNGCFVDALNVVPHVFLLFITF
PILFIGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGVSESRHL
HLYMPAGMAFLAAITSVVYYHNIETSNFPKLLIALLFYWTLAFITKTIKFVKFCDNGVGF
SQLRFCLTGLLVVLYGMLLAVEINVIRVRRYVFFKTPKEVKPPEDLQDLGVRFLQPFVNL
LSKGTYWWMNTFIKTAHKKPIDLKTIGKLPIAMRALTNYIRLNEAFEAQKFNSDQNKRSS
TPQGSRSIWRALCCAFGRPLLLSSTFRILADLLGFAGPLCISGIVHNVGKGNNTIRPQTK
ILGVFFISSQEFLSNAYVLAVLLFFALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKI
MQLSTSNMSMGEMTAGQICNLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVLLLYYLLGIS
ALIGAAVIIVLAPVQYFVATKLSQAQRSTLEYSNERLKKTNEMLRGIKLLKLYAWEHIFH
SSVEETRQKEMTSLKSFALYTSISIFMNAAIPIAAVLITFVVHAHLTRKADFSPSVAFAS
LSLFHILVSPLFLLSSVVRSTVKALVSVQKLSEFLSSEEIGEEHDKSSELRSADNHSKYQ
AVPLKVVNRKRPAREDWNNYSSHMRRPINITEADDFCVKITNGFFTWTPEGPPALSNIDI
RIPQGQLTMIVGQVGCGKSSLLLAILGEMQKISGNISWTSCTSDSETGEDFSPEKECPVD
MEVRKRGAVAYASQKPWLLNATVEENITFESSFNKQRYKAVIDACSLQPDIDILPHGDQT
QIGERGINLSGGQRQRISVARALYQQTNVVFLDDPFSALDIHLSDHLMQEGILKMLREDK
RTIVLVTHKLQYLPHADWIIAMKDGNIQREGTLKDIQKSETELFEHWKTLMNRQDQELEK
ETTIEENPVLERTNLRRTMYSREALLKDDEEDEEEVTESDDEDNLSSVLHQRAKMPWRAC
GKYLSAAGILLLPLLLLSQLLKHTVMVAIDYCLALWTEHAISIKIEPETKNCSQCMEFDH
SPYSKVFSILCCLGIVLCLVTSIAVEWTGLKVTKKLHSSLLNKIILAPMRFFETTPLGSI
LNRFSADCNTIDQHIPATLECLSRSTLLCVSALAVISYVTPMFLIALLPLAIMCYFIQKY
FRVASRDLQQLDDSTQLPLLSHFSETVEGLTTIRAFRYEAKFRQKLLEYTDSNNIASLFL
TAANRWLEVRMEYIGACVVLIAAVTSITSCLYNKITSGLVGLGLTYALMVSNYLNWMVRN
LADMEIQLGAVKRINGLLKTEAENYEGLLSSSQIPQNWPDRGEIQIQNLSVRYDSNLKPV
LKHVNAHISPGQKIGICGRTGSGKSSFSLAFFRMVDTFEGRIIIDGIDIAKLPLQTLRSR
LSIILQDPILFSGTIRFNLDPEKKCTDSMLWEALEIAQLKHVVKALPGGLDAIVTEGGEN
FSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVH
TILNSDLVIVMKRGVILEYDKPEVLLEQEDSVFASFVQADK
NT seq 4806 nt   +upstreamnt  +downstreamnt
atgtgcgcggaggcggaggcggcgcccggctgcgcgcagggtcccgccatggccctggcg
ttctgcggcgacgagggcaactccaccgcctacaacgtggaccacggcgtgctcaacaac
ggctgcttcgtggatgcgctcaacgtggtgccgcacgtcttcttgctcttcatcaccttc
cccatcctcttcatcggatgggggagtcagagttccaaagtacatatacatcatagcaca
tggcttcattttcctggccacaatttacgctggatactgacttttatccttttgtttgtg
ctggtgtgtgaaattgcagagggcatagtgtctgatggggtttctgaatcccgccacttg
cacctgtacatgccggcgggaatggcattcctggcagccatcacatcagttgtctattac
cacaatattgaaacatccaatttccccaagctgttaatagcattgctgttctactggact
ttagctttcataactaaaaccatcaaatttgtgaagttctgtgataatggggttggattt
tctcagcttcgattttgcctcacaggactcttggttgtcctttatggaatgctattagct
gtagaaatcaatgtcatcagggtgaggaggtatgttttcttcaaaactcctaaagaagtt
aaacctcctgaggacctccaggatcttggtgtccgattcttgcagccctttgtgaatctg
ttatccaaaggaacatactggtggatgaacaccttcatcaagactgcccataaaaagcca
atagacttgaaaaccataggcaagcttcccattgctatgagagctctgaccaattacatt
cgccttaacgaggcctttgaagcacagaagtttaattctgaccagaataaaagatcatcg
actccccaaggctccagatccatttggcgtgctctctgctgtgcttttggaagaccctta
cttctcagcagcacattccgtatcctggctgacttgcttggatttgccgggccgctctgc
atctctgggattgttcacaacgttggcaaaggaaataacaccatccgcccacagactaaa
attctaggtgttttctttatttcatcacaagagttcctgtccaatgcttatgttttggct
gtacttctattttttgccctcctgttgcaaaggacatttctgcaagcatcatactatgtt
gctattgaaacaggaatcaacttgagaggtgcaatacagacaaaaatatacaataaaatt
atgcagctttcaacttctaacatgtctatgggggagatgacagcaggccagatctgtaac
ctggttgccatagacacaaatcagctgatgtggttcttcttcctctgccctaacctttgg
gctatgccagtacagataattgtaggagttcttctgctctactaccttcttggaatcagt
gccttaattggagcagcagtaatcatagtccttgcacctgttcagtactttgtagccaca
aaactctcacaggcccagcgaagcacattggagtactccaacgagagactgaagaagaca
aatgagatgctgcggggcattaagctcctgaaactctatgcttgggagcacatatttcac
agcagcgtggaggaaaccagacagaaagaaatgactagcctcaagtcttttgccctttac
acctccatatccatctttatgaatgcagcaataccaattgcagctgtgcttataacattt
gttgtccatgctcatctgacaagaaaggctgacttctccccatcagtggcatttgcctcc
ctctccctgtttcatatccttgtgtctccgttgttcctgctctcaagtgtggttagatcc
actgtcaaagcattagtaagtgtgcagaaattgagtgaattcctgtcaagtgaagaaatt
ggagaagagcatgataaatcttcagagctaagaagtgcagataatcacagcaagtaccaa
gcagtaccactcaaggttgtgaaccgcaagaggcctgccagggaggactggaacaattac
agctctcacatgagaagacccattaacatcacagaagcagatgatttttgtgtaaagatc
acaaatggattttttacttggacacctgaaggtcctccagcattatctaatattgatatc
cgaatccctcaaggccagctaacaatgattgtaggacaggtgggctgtggtaagtcatct
ctcttgctggccatacttggtgagatgcagaagatctctgggaacatatcctggaccagc
tgcacttctgacagtgagacgggggaagatttcagcccagagaaagaatgtcctgttgac
atggaagtcaggaaaagaggtgcagtggcttatgcatcccagaagccttggctgctcaat
gccacagtggaagagaatatcacgtttgaaagctcttttaacaaacagaggtacaaagca
gtaattgatgcttgttccctccagcctgatattgacattctgcctcatggagaccaaacc
cagattggagagaggggtattaatctgtctggagggcagcgccagcggatcagtgtggca
cgagcactttaccagcagacaaatgttgtgtttctggatgatcctttttctgccctggat
atccacctgagtgaccatctcatgcaagaagggatcctgaagatgctgcgggaggacaag
aggaccattgtgctggtgactcacaagctgcagtacttgccccacgctgactggataatt
gcaatgaaagatggtaacatccagagagaaggaacactcaaggacattcagaaatcagag
actgagctctttgaacactggaagacattaatgaatcgacaagaccaagagctggagaag
gaaacaactattgaggaaaaccctgttttggaaagaacgaatctccggaggacgatgtat
tcccgggaagcattactgaaagatgatgaagaggatgaagaagaagtaacagagagtgat
gatgaagacaacctgtcttcagtgctgcatcagagagccaagatgccctggagagcctgt
ggcaagtacctgagtgcagcagggatcctcctgctgcccctgctgctcctgtcccagctg
ctgaagcacacagtgatggtggccatcgactactgcctggccctttggactgagcatgcc
atttctatcaagatcgagcccgagacaaaaaactgctcccagtgcatggaatttgaccat
tctccatattcaaaggttttcagcattctttgctgccttggaattgtattatgccttgtc
acatcaatagcagtggagtggactggcttgaaagtcaccaaaaagctacactcttcttta
ctaaataaaattattttggctccaatgaggttttttgaaacaacacctctgggaagtata
ttaaacagattttcagctgactgcaataccattgaccagcacatcccagctaccctggag
tgcttgagccgttccaccttgctgtgtgtgtctgcccttgctgtgatctcctacgtcacg
cccatgttcctcattgccctgctgcccctggcaatcatgtgctacttcatccagaagtat
ttccgagtggcctcccgggacctgcagcagctggatgacagcactcagctaccattactc
tcccatttttcagagactgttgaaggtcttaccaccatccgagccttcaggtatgaagcc
aaattccgacaaaaacttcttgaatacacggattccaacaacattgcttcccttttcctc
acagcagccaatcgctggctggaagttcgcatggagtacattggagcatgtgtggtactc
atagcagctgtcacttctattaccagttgcctgtataataaaatcacttcaggacttgta
ggcttgggactaacctatgctcttatggtgtccaactatctgaattggatggttcgtaac
ctggctgacatggagatccagctgggggcagtgaaaagaatcaatggccttctcaaaaca
gaagctgaaaattacgaagggctcctttcttcctcacagattccccagaactggccagac
agaggggagatccaaatccagaacctcagtgttcgatatgacagcaacctgaagccagtg
ctaaaacatgtcaatgcccacatctcaccaggacaaaagattgggatctgcggccgaaca
ggcagtggaaaatcctccttctctcttgcatttttcagaatggttgacacctttgagggg
aggattatcattgatggtatagatattgcaaagctgcccttacagacactgagatccagg
ctgtcaatcatcctccaagatcctattttattcagtggaacaatccggtttaacttggac
cctgagaagaagtgcactgacagcatgctctgggaagcactggaaatagcacagctcaag
catgtggtgaaggcactacctgggggcctagatgcaatagtcacggaagggggtgaaaac
ttcagccagggccaaagacagctgttctgcctggcaagagcttttgtgaggaagacgagc
atcttcatcatggatgaagccacagcatctattgacatggcaacagagaacattctccag
aaggtggtcatgactgcgtttgctgaccggactgtggttacaatagcacaccgtgtgcac
acgatcctcaattcagatttggttattgtaatgaagagaggggttattttggaatatgac
aagcctgaggttctgctagaacaagaagacagtgtctttgcttcttttgtacaagcagat
aagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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