KEGG   Lonchura striata domestica (Bengalese finch): 110477830
Entry
110477830         CDS       T05897                                 
Name
(RefSeq) keratin, type II cytoskeletal 6A-like
  KO
K07605  type II keratin, basic
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lsr04812]
    110477830
   04147 Exosome [BR:lsr04147]
    110477830
Cytoskeleton proteins [BR:lsr04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     110477830
Exosome [BR:lsr04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   110477830
  Exosomal proteins of other body fluids (saliva and urine)
   110477830
  Exosomal proteins of colorectal cancer cells
   110477830
  Exosomal proteins of bladder cancer cells
   110477830
SSDB
Motif
Pfam: Filament Keratin_2_head TPR_MLP1_2 ADIP CENP-F_leu_zip Alanine_zipper DUF1664 BRE1 Baculo_PEP_C Mce4_CUP1 DUF948 COG6_N KfrA_N Myosin_tail_1 ATG16 Crescentin LPP DUF745 Bap31_Bap29_C Golgin_A5 DUF5819
Other DBs
NCBI-GeneID: 110477830
NCBI-ProteinID: XP_021399614
Position
29:1859064..1862899
AA seq 537 aa
MSRQCTVRSLGRTSFSSASAFIPNASSSSLCLRPVSQAGSCGATTGYGRFIGGFGSRSLH
SLGECQRISVAGRGGVSYGPAGFGAGTGISYGFGGAVAGPFGFGGGPGFPAVPVGGIHEV
SINQSLLKPLNLDFHPKIKSIRKDEKDQIQTLNNKFASFIDKVRFLEQQNKVLETKWALL
QEQGNKTVRKNIEPLFDTYVNNLRRHLSSLMTDKENLAGELSKMHSIAEDFKNKYEEELN
KHADVEIEFVTLKKEVDTAYMDKTKQQARLDSLTEEIDFLRALYEAELSQIQSQISDTSV
ILTMDNNRSLNMEGIIAEVKAQYEEIANRSRAEAESWYQSRYEELQATAGRHGDDLRNTK
QEISEINRHIQRLRSEIDSVKKQVTGLQTAITDAEQRGEMALKDARTKLEDLETALQKAK
ADLARQLREYQELMNVKLALDIEIVTYRKLLEGEECRLSGEGAGSVNISVTRTTSGMGYG
SRSCLSPSGGAGGEVCAGMGMGYISGSGYGTGGSCVLGGSSSSFKSISTSSSTRGCY
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgtcccgccagtgcactgtgaggagcttgggcagaactagcttcagctctgcttctgcc
ttcatcccaaatgccagcagctccagcctctgcctgcgccccgtatcccaagctggaagc
tgtggggccaccactggctatggaaggttcattggagggtttggaagcaggagcctccac
agccttggcgaatgccagaggatctccgtagctggaagaggtggtgtctcctacggacct
gcaggttttggtgctggcactgggatctcctatgggtttggtggggcagttgctggtccg
tttgggtttggtggtggccctggattccctgctgttccagttgggggcatccatgaagtg
tcaatcaaccagagccttctgaagccgctcaacctggactttcaccccaaaatcaagagt
atccgtaaggatgagaaggatcagattcaaaccctcaacaataaatttgcctccttcatc
gacaaggtccgattccttgaacaacaaaacaaggtcctggagaccaaatgggctcttctg
caagaacaagggaacaaaacagtgagaaagaacattgagcccctctttgacacctacgta
aacaacctcaggaggcacctgagcagcctaatgacagacaaggagaacctggcaggggag
ctgagcaagatgcacagcattgctgaggacttcaagaacaaatatgaagaggagctcaac
aaacacgcggatgtcgagatcgagtttgtgaccctgaaaaaggaggtggacactgcctat
atggacaagacaaagcagcaggccaggctggattcactcacagaagagatcgacttcctc
agagccctctacgaagcagagctgtcccagatacagagccagatctccgacacctctgtc
atcctgaccatggacaacaaccggagcctgaacatggagggcatcatcgccgaggtgaag
gcgcagtacgaagagatcgccaaccggagccgcgccgaggccgagtcctggtaccaatcc
aggtacgaggagctgcaggccacggctggcaggcatggggacgacctccggaacaccaag
caggagatctcggagatcaaccgccacatccagcgtctccgatctgagattgacagcgtg
aaaaaacaggtcactgggttgcagacagccatcactgatgcagaacagcgtggggagatg
gccctcaaggacgccaggaccaaacttgaggacctggagacagccttgcagaaagctaag
gccgacctggcccgacaactccgggagtaccaggagctcatgaatgtcaagctggccctg
gacatcgagattgtgacttacaggaagctgctggagggcgaggagtgcaggctctctggg
gaaggcgccggctcagtgaacatttctgtgaccagaaccacttcaggaatgggatatgga
agcaggagctgcctgagccccagcggtggggctggaggcgaggtctgtgctggaatggga
atgggctacatctccggaagcggatacggcacaggtggctcatgcgtgctcggaggcagc
agctccagcttcaagtccatctccaccagctcttccaccaggggatgttattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (30)   

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