KEGG   Lactuca sativa (garden lettuce): 111894334
Entry
111894334         CDS       T05352                                 
Name
(RefSeq) CLP protease regulatory subunit CLPX3, mitochondrial isoform X1
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lsv03110]
    111894334
Chaperones and folding catalysts [BR:lsv03110]
 Heat shock proteins
  HSP100
   111894334
SSDB
Motif
Pfam: AAA_2 AAA ClpB_D2-small AAA_22 AAA_5 MCM RuvB_N Mg_chelatase Sigma54_activ_2 Sigma54_activat AAA_7 IstB_IS21 AAA_14 AAA_16 AAA_24 ABC_tran DEAD AAA_18 AAA_28 T2SSE nSTAND3 NACHT TsaE AAA_29 AAA_30 ResIII AAA_33
Other DBs
NCBI-GeneID: 111894334
NCBI-ProteinID: XP_023746178
Position
4:complement(269867123..269872990)
AA seq 685 aa
MMSGMWRWRKIRDIIAATEAGMRISTPYASRRGFVNWLLHAGAGGPYIRPRSLTGLQTRY
KWDHGGGGSDDNGSRTTTMTRRIKAEANCPRCSKQMNLVFSNNTHLIPPSSSAGNESESP
PDPGSDSNRKGAYQAVNLCPNCKTAYYFRPYKMAPLQGRFVEIGRVKNSNGNGRDKRQAN
DDDEYANKLRASFWETLKAYGGEPPENWTNPPPPPPLSGNGLAVHTPPGPPFPPGLNVIR
ARGPGGGGGGGGEKYGSGGSNLGKNLPTPKEICEGLDKFVIGQKRAKKVLSVAVYNHYKR
IYHASLQKGSGADPGRSKTEDDDDNVDLEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVI
ADATTLTQAGYVGDDVESILHKLLTVAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDV
SGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERR
QDSSIGFGAPVRANMRNSALTNAAVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSAL
TEDQLVQVLMEPKNALGKQYKKLFQMNDVKLHFTEKAQRLIAQKAMAKNTGARGLRAILE
TLLTDSMYEIPDAKTGKDRVDAVVIDEESVGSVDSCLSGCGGKILRGDGALENYLAKTRS
KEQMQEADGQLVEGEEETSSKAMSM
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgatgtctgggatgtggagatggaggaagattcgagatattatagctgcaacagaagca
ggaatgagaatttccaccccgtatgcatcgaggcgtggtttcgttaattggctgctacat
gccggcgccggcggtccgtacattcgtccgaggtcgttgactggtctacaaacaaggtat
aaatgggatcatggcggtggtggttctgatgacaacggcagtagaaccacgacgatgacg
cggaggattaaagccgaagctaactgccctcgttgttctaagcaaatgaatctggttttt
tccaataacacccacctaattccgccgtcttcatccgccggaaatgaatcagaatcaccg
cctgatcctggttccgattccaatcgcaaaggcgcttaccaggctgtcaacctttgtccc
aactgtaaaaccgcctactatttccggccgtacaagatggctcctttacaaggccgtttt
gtcgaaattggtagggttaaaaacagtaatgggaatggaagggataagagacaggctaat
gatgatgatgaatatgctaacaaacttagggcttcgttttgggagacattgaaggcttat
ggtggtgaaccaccggagaattggaccaatcctcctccccctcctcctctctctggcaat
ggacttgcggtgcatactccccctggacctccgtttccaccggggttgaatgtaatacgt
gcaaggggtcctggcggtggtggtggtggtggtggagagaagtatgggtcaggtggctca
aatttggggaagaatttgcctactcctaaggagatttgtgagggactggataagtttgtc
attggtcaaaagcgtgccaaaaaggtcctttcagtagctgtttataaccattacaaaagg
atatatcatgcctccttacagaaagggtcaggagcagatccaggaagatctaagactgaa
gatgatgatgacaatgtagatttagaaaaaagcaatgtacttctaatgggcccaactggc
tcagggaagacattacttgcaaagactctagctcgttttgttaatgttccatttgtcatt
gctgatgcaaccaccttgacacaggctggttatgttggtgatgatgtggaatctatattg
cacaaactacttacggttgctgaattcaatgttgaagctgcacaacaagggatggtttac
attgatgaagttgataagataacgaaaaaggctgagagcttaaacattagcagagatgtc
tctggtgagggagtccaacaagctctacttaagatgctggaaggaactatagtgaacgtg
cctgaaaagggggcgaggaagcatcctagaggtgataacattcagatagatacaaaggac
atccttttcatttgtggtggcgcatttgttgatttggagaaaaccatatccgagagacgg
caggactcttcaataggttttggagcgcctgttcgtgctaacatgagaaacagtgcactc
acaaatgctgcagtcacatcatctttacttgaatctgttgaaagtagtgatcttatagcc
tatggactcatacccgagttcataggacgatttccaattttagtaagtttgtcagctcta
accgaagatcaacttgttcaggtccttatggaacctaagaatgctctcgggaagcaatat
aagaaattgtttcagatgaacgatgtgaaactacatttcacagaaaaggcacaaagatta
attgctcaaaaggcaatggccaagaacacaggtgccagagggttaagagccatactcgaa
actcttctaaccgactctatgtacgagattcccgacgccaaaacaggaaaggatcgagtg
gatgcggttgtgattgatgaggaatcagttgggtcagtagattcttgtttatcaggatgt
gggggaaaaatactccgtggtgatggcgcgttagaaaattatcttgcaaaaacaagatct
aaagaacaaatgcaggaagctgatgggcaattggtggaaggagaagaagaaacctcatca
aaagccatgagcatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (27)   
   Pfam (27)   
All databases (42)   

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