KEGG   Lipotes vexillifer (Yangtze River dolphin): 103070666
Entry
103070666         CDS       T03090                                 
Symbol
PSMC6
Name
(RefSeq) 26S protease regulatory subunit 10B
  KO
K03064  26S proteasome regulatory subunit T4
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03050  Proteasome
lve05010  Alzheimer disease
lve05012  Parkinson disease
lve05014  Amyotrophic lateral sclerosis
lve05016  Huntington disease
lve05017  Spinocerebellar ataxia
lve05020  Prion disease
lve05022  Pathways of neurodegeneration - multiple diseases
lve05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:lve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    103070666 (PSMC6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    103070666 (PSMC6)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    103070666 (PSMC6)
   05012 Parkinson disease
    103070666 (PSMC6)
   05014 Amyotrophic lateral sclerosis
    103070666 (PSMC6)
   05016 Huntington disease
    103070666 (PSMC6)
   05017 Spinocerebellar ataxia
    103070666 (PSMC6)
   05020 Prion disease
    103070666 (PSMC6)
   05022 Pathways of neurodegeneration - multiple diseases
    103070666 (PSMC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:lve03051]
    103070666 (PSMC6)
Proteasome [BR:lve03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     103070666 (PSMC6)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 AAA_2 AAA_22 AAA_5 PRS7_OB RuvB_N nSTAND3 Prot_ATP_ID_OB_N AAA_14 DUF815 AAA_18 AAA_11 AAA_7 AAA_33 TIP49 RNA_helicase AAA_3 TPR_MLP1_2 Mg_chelatase bpMoxR DUF5906 AAA_24 AAA_28 TsaE AAA_25 NACHT ATPase Occludin_ELL AAA_17 ATPase_2 Parvo_NS1 DUF4140 IstB_IS21 COG4_N Med4 AAA_19
Other DBs
NCBI-GeneID: 103070666
NCBI-ProteinID: XP_007446020
UniProt: A0A340WG60
Position
Unknown
AA seq 403 aa
MAIPGIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND
LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLT
IMRYLPREVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP
PKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQ
PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLD
PALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV
CTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggccattcccggcatcccctatgagcggcggcttctcatcatggcggaccctagagat
aaggcgcttcaggactaccgcaagaagctgctggagcacaaggagatcgacggccgtctc
aaggagttaagggaacaattaaaagaacttaccaagcagtatgaaaagtctgaaaatgat
ctgaaggccctacaaagtgttgggcagattgtgggtgaagtacttaagcaattaactgaa
gaaaaattcattgttaaagctacaaatggaccaagatatgttgtgggttgtcgtcgacag
cttgacaaaagtaagctgaagccaggaacaagagttgctttggatatgactacactaact
atcatgaggtatttgccaagagaggtggacccactggtttacaacatgtcgcatgaggac
cccggggatgtttcttattctgagatcggagggttgtcagaacagattcgggaattacga
gaggtaatagaattacctcttacaaacccagaattattccaacgtgtaggaataatacct
ccaaaaggctgtttgttatatggaccaccaggtacaggaaaaacactcttggcacgagct
gttgctagccagttggattgcaatttcttaaaggttgtatctagttctattgtagacaaa
tacattggtgaaagtgctcgtttgatccgagaaatgtttaattatgccagggaccatcag
ccatgcatcatttttatggatgaaatagatgctattggtggtcgtcggttttctgagggt
acttcagctgatagagagattcagagaactttaatggagctactgaatcaaatggatgga
tttgatactctacatagagttaaaatgatcatggctacaaacagaccagatacactggat
cctgctttgcttcgtccaggcagattagatagaaaaatacatattgatttaccaaacgaa
caagcaaggttagatatattgaaaatccatgcaggtcccattacaaaacatggtgaaata
gattatgaagcaattgtgaagctttcagatggctttaatggagcagacctgagaaatgtt
tgtactgaagcaggtatgtttgcaattcgtgctgatcatgattttgtagtacaggaagac
ttcatgaaagcagtcagaaaagtggctgattctaagaagctagagtctaaattggactac
aaacctgtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (69)   
   KEGG ORTHOLOGY (1)   
   RefGene (65)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (39)   
   Pfam (39)   
All databases (123)   

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