KEGG   Monodelphis domestica (gray short-tailed opossum): 100021320
Entry
100021320         CDS       T01031                                 
Symbol
TRPC4
Name
(RefSeq) transient receptor potential cation channel subfamily C member 4
  KO
K04967  transient receptor potential cation channel subfamily C member 4
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04360  Axon guidance
mdo04929  GnRH secretion
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09150 Organismal Systems
  09152 Endocrine system
   04929 GnRH secretion
    100021320 (TRPC4)
  09158 Development and regeneration
   04360 Axon guidance
    100021320 (TRPC4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mdo04040]
    100021320 (TRPC4)
Ion channels [BR:mdo04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   100021320 (TRPC4)
SSDB
Motif
Pfam: Ion_trans TRP_2 Ank_2 Ank_4 Ank Ank_3 PKD_channel
Other DBs
NCBI-GeneID: 100021320
NCBI-ProteinID: XP_001368084
Ensembl: ENSMODG00000010167
UniProt: F6TA59
Position
4:complement(311243580..311521770)
AA seq 975 aa
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRDSWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKELSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLLKWIWTHLCKKKIRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGSKLASLRSSKIMKEPPLEAEEKSD
SEGSDKTKKKNFSLFDITSMIHPRSAAIASERHNVSNGAALMVHETPKEKQKKVNFVADV
KHFGLFHKRSKPHSAEASANQIFSVSEEVSRQQADEEFGKHFQLEARGLATKGERSVAGL
SEPCVLSDTKRRNRETLNLPFGESLCPLESEKLVVEDTVPIIPKDMHAKEEASAKDCELK
ITETVIHEDYVTTRL
NT seq 2928 nt   +upstreamnt  +downstreamnt
atggctcagttctactacaaaaggaatgtcaatgctccctacagagatcgcattcctctt
cggattgtaagagcagaatctgaactctcgccctcagaaaaagcctacttgaatgctgtg
gagaagggggattatgcaagtgtcaagaaatctctggaggaggcagaaatttattttaaa
ataaacattaattgtattgatccccttggaagaactgctcttctcattgcaattgaaaat
gagaacctggagcttattgaattgctcctaagttttaatgtgtatgttggagatgctcta
ttacatgccatcagaaaggaagttgtgggggctgtggagctgctattaaaccacaagaaa
cccagtggagagaaacaggtgcctccaatactccttgataagcagttctctgaattcaca
ccagatatcacaccaataattttggcagcccatacaaataattatgagataataaaactc
ttagtccagaaaggtgtttctgtacctagacctcatgaagttcgctgtaattgtgttgaa
tgtgtctccagttcagatgtagacagcctccgtcattctcgttctagattaaatatatac
aaagccttggcaagtccatctctgattgcattgtcaagtgaggatccatttctcacagct
tttcaactcagttgggagcttcaagaactgagcaaagtggaaaatgaatttaagtctgaa
tatgaagaactatcccgacagtgcaaacaatttgctaaggaccttctggatcagaccagg
agttccagggagttggaaatcatcctgaattatagagatgataacagcttgatagaagaa
caaagtggaaatgatcttgcaagactcaagttggctataaagtaccgacaaaaagagttt
gttgcacaaccgaactgtcagcagctccttgcatctcgctggtatgatgagtttccaggc
tggaggagaagacactgggctgtgaagatgttgacatgcgtcatcataggactgcttttc
cctgtcttctctgtatgctacctgatagcccccaaaagtccccttggactcttcatcagg
aaaccatttatcaagtttatctgccatacggcatcctatttgactttcttgttcctgctg
ctacttgcctctcaacatattgacaggtcagacttgaacaggcaggggccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggattcatatggggtgaaattaaacag
atgtgggatggtggacttcaagattacatccatgactggtggaatctaatggattttgta
atgaattccttatacttggcaacaatctctttgaaaatcgttgcatttgtaaagtatagt
gcactgaacccccgagattcctgggatatgtggcaccccactttggtggcagaggcttta
tttgctatcgcaaacattttcagttccctgcgtctgatctcactgtttactgccaattct
cacctgggacctctgcagatctctctaggaagaatgctgctagacattctgaagtttctg
ttcatatactgtcttgtgctactagcttttgcaaatggcttaaatcagttgtacttctat
tatgaagaaacaaaagaattaagttgcaaaggaatacggtgtgagaaacagaacaatgcc
ttttccacgttatttgagacacttcagtctctattttggtccatatttggactcattaat
ctttatgtgaccaatgtcaaggcacagcatgaatttacagagtttgttggggccaccatg
tttgggacatacaatgtcatctctctagtcgttctactcaacatgctcattgctatgatg
aataattcttatcaactcattgctgatcatgcagacattgaatggaaatttgcacggaca
aaactatggatgagttattttgaagaaggaggtactctgcctactcccttcaatgtcatc
ccaagccccaagtctctctggtatcttctcaaatggatctggacacacctatgcaagaaa
aagattagaaggaaaccagaaagttttggaacaatagggaggcgggcagctgataattta
agaagacaccatcagtaccaggaagttatgaggaacttggtgaagagatatgttgcagca
atgattagagatgctaaaactgaagaaggtctgacagaggaaaattttaaggagctaaag
caagatatttcaagctttcgttttgaagtcctgggattgctgaaaggaagcaagcttgcc
tctttacgatcttcaaaaatcatgaaggagcctccattggaggctgaggagaagagtgac
agtgaagggagcgacaagacaaagaaaaagaatttcagcctctttgatatcactagcatg
attcatccaaggtcagcagccattgcttcagaaagacataacgtgagcaatggtgctgcc
ctcatggttcatgaaacccccaaagagaagcagaagaaagtgaactttgtggcagatgtc
aaacactttgggctgtttcataaacgctcgaaaccacactctgcagaggcaagcgccaac
cagatcttctcggtttcagaggaagtttcccgacaacaggctgatgaagaatttggaaaa
cattttcaactggaagcaagaggactggccaccaaaggtgaacggagtgttgcaggactc
agtgaaccatgtgtgttatcagacacaaaaagaaggaacagagagactttgaatttacct
tttggggagagcctttgtcccttagaatcagagaagttggtggtagaggacactgtgccc
ataataccaaaggacatgcatgctaaggaagaggccagtgctaaagactgtgaattaaaa
atcacagagacagtgatacacgaagactatgtaacaacaagattgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (35)   

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