KEGG   Mannheimia haemolytica D153: F382_01095
Entry
F382_01095        CDS       T02746                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
mhae  Mannheimia haemolytica D153
Pathway
mhae03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mhae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    F382_01095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhae03400]
    F382_01095
DNA repair and recombination proteins [BR:mhae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     F382_01095
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      F382_01095
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD EAD9 AAA_22 AAA_30 UB2H DUF5683 DUF87 FlaG
Other DBs
NCBI-ProteinID: AGQ24673
Position
182357..184375
AA seq 672 aa
MSKQGKPFILHSPFKPSGDQPSAIAKLTEGLNDGLAHQTLLGVTGSGKTFTIANVIAKLN
RPAMVLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPASDTFIEKDASINE
QIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVDAYMQMMLHLQVGAMIGQREILSRLA
ELQYTRNDQAFQRSTFRVRGDVIDIYPAESDEVALRVELFDDEIENLSLFDPLTGHSLGK
VPRYTIYPKTHYVTPRERILEAIEQIKVELADRRTYFIKENKLLEEQRIAQRTQFDIEMM
NELGYCSGIENYSRYLSGRKEGEAPPTLFDYMPADGILVIDESHVTVPQIGGMYRGDRAR
KETLVQYGFRLPSALDNRPLRFEEFERLSPQTIYVSATPGAYELEKNPDVVDQVVRPTGL
LDPIIEVRPVATQVDDLLSEIHKRVAVDERVLVTTLTKKMAEDLTDYLDEHGVRVRYLHS
DIDTVERVEIIHDLRMGMFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQT
IGRAARNLNGKAILYGDRITNSMQKAITETERRREKQMKYNEEHGITPQALNKKVGELLD
IGQSDKPKRGKQAVKKAENSATDYKPKSRKELEKELKTLEQQMRDFAKDLEFEKAAAVRD
KLQHLKAYLLEV
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgagcaagcaaggcaaaccctttatcctccattctcctttcaagccctccggcgaccaa
ccaagtgcgattgccaaattgaccgaaggcttaaatgacggcttggcacatcaaacctta
cttggcgtaaccggctcggggaaaacctttaccattgctaatgtgattgccaagctcaat
cgcccggcgatggtgcttgccccgaataaaacccttgccgcccagctttatgccgagatg
aaagcgttctttccggaaaatgcggtggagtatttcgtctcttactatgattactaccag
cccgaagcctatgtgccggcaagcgatacctttatcgagaaagatgcctctatcaatgag
cagatcgagcaaatgcgactttccgcaaccaaatcctttttggaacgccgagatacgatt
gtagtggcgtccgtttctgccatttacggcttgggtgatgtggacgcttatatgcagatg
atgttgcatttgcaagtgggggcgatgattgggcagcgtgaaattctctctcgccttgcc
gaattgcaatatactcgcaacgatcaggcgttccaacgttcgactttccgagtgcggggc
gatgtgattgatatttaccctgccgaaagcgatgaagtagcgttaagggtagagctgttt
gacgatgaaatcgaaaatctgtcgctgtttgatccgcttacagggcatagcttgggcaag
gtgcctcgctataccatttacccgaaaactcactatgtgacccctcgggaacggattttg
gaggcaatcgagcaaattaaggtcgagcttgccgaccgtcgcacctatttcatcaaagag
aataaattgctggaagagcagcggatcgcccaacgtacgcagtttgatattgagatgatg
aacgagctgggctactgttcgggcattgaaaactactcacgctatctctcgggcagaaaa
gagggcgaagcccctccgaccctgtttgattatatgccggcggacggtattttggtgatt
gatgaaagccacgttactgtgccacaaattggcggaatgtatcgaggcgaccgagcgaga
aaagaaacattggtgcaatacggtttccgtctgccgtctgcactggataaccgcccgttg
agatttgaagagtttgaacgtctttcaccacagacgatttacgtttctgccacaccgggg
gcgtatgaattggagaaaaatcccgatgtggtggatcaagtagttcgtccaaccggcttg
ctcgatccgattatcgaagttcgccccgttgctacgcaggtggacgatttactgtctgaa
attcacaaacgagtggcggtggacgaacgggtgctggtgacaacactcaccaaaaaaatg
gcggaagatctcaccgattatttggacgaacatggcgtacgagttcgttatctacatagc
gacattgacacggtggaacgggtcgaaattatccacgatttacgaatgggaatgtttgat
gtgctggtggggatcaacttattgcgtgagggcttagatatgcccgaagtgtcgctggtt
gccattcttgatgcggataaagagggatttttacgttccgaacgctcgttaattcagacc
atcggacgtgccgcccgaaacctcaacggaaaagcgattttatacggcgaccgcattacc
aactcaatgcaaaaagcaattactgagaccgaacgccgccgtgaaaagcagatgaaatac
aacgaagaacacggcatcacgccacaagcgttgaacaaaaaagtgggtgaattgctcgac
atcggacaatccgacaagccaaaacggggcaaacaagcggtcaaaaaagccgaaaattct
gcaaccgactacaagccgaaatcccgtaaagaactggaaaaagagcttaaaacgctggaa
caacaaatgcgtgattttgcgaaagatctggaatttgaaaaagcggctgcggtaagggat
aagttgcagcatttaaaggcgtatttgttggaggtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (20)   

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