KEGG   Mannheimia haemolytica USDA-ARS-USMARC-184: B824_16370
Entry
B824_16370        CDS       T03786                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
mhat  Mannheimia haemolytica USDA-ARS-USMARC-184
Pathway
mhat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B824_16370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mhat03019]
    B824_16370
Enzymes [BR:mhat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     B824_16370
Messenger RNA biogenesis [BR:mhat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     B824_16370
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CMS1
Other DBs
NCBI-ProteinID: AJE08432
Position
complement(1527124..1528359)
AA seq 411 aa
MSNHLTEHRFIDFPIHTNVLNALNSKGFEFCTPIQAKTFPITLNGNDIAGQAQTGTGKTL
AFLIATFNHLLNNEIETAKNQPRALILAPTRELAVQIGADAQLFLPHCDLKLALAYGGDG
YDKQIQAIEKGVDILVGTTGRVIDYVKQGIIHLDKIQVIVLDEADRMFDLGFIKDIRYLM
RKAPVPTERLTLLFSATLSAKVRELAYEDMDNAEYIEIEPLQRTGHRIKEELFYPSNEDK
MALLLTLLEEEWPDRCMIFANTKHKCEEIWQYLAADGHRIGMLTGDIPQKKRLSLLDNFT
KGNLDILVVTDVAARGLHIPDVTHVFNYDLPDDKEDYVHRIGRTGRAGESGHSISFACER
YAVNLPAIEEYIGHQIPVSQYDKESLLTLPKVNRSRSKKTFLAKTKKNSRN
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgtcaaatcatcttaccgaacaccgttttattgacttccccattcacacaaatgtactc
aatgcgttgaatagtaaaggcttcgagttctgtacacctatccaagcaaaaactttcccg
attacgcttaacggaaatgatattgcaggacaggctcaaacaggcacaggtaaaacgctt
gcttttttaattgccacgttcaaccatttattaaataacgaaattgagacagcaaaaaat
cagccaagagcattaattcttgcaccaactcgtgagctggcggtacaaatcggggcagat
gcacagctttttttaccacattgcgatcttaaacttgcccttgcttatggtggtgatggt
tacgacaagcaaatacaagccatagaaaaaggggtagatattttagttggaaccacaggg
cgtgtgatcgattatgttaagcaagggattattcatttagataaaatccaagtgattgtg
ctagatgaagctgatcgtatgtttgatctcggttttattaaagatattcgttatttaatg
agaaaagctcccgtgcctactgagcgtttaacgttgctcttttcagcaactttatccgct
aaagtacgtgagcttgcttatgaagatatggataatgctgaatatattgagattgaaccg
ctacaacgtacagggcatcgtataaaagaagagttattttatccgtctaatgaagacaaa
atggcacttttattgacgttattggaggaagaatggccagaccgctgtatgatttttgcc
aatactaagcataaatgtgaggaaatttggcaatatttagcagccgatggtcatcggatt
ggaatgctaacaggtgatattccacagaaaaaacgcctatctctgttagataattttacc
aaaggtaatttagatattttagtcgtgactgatgtggcagcacgtggattacatattcca
gatgttacgcatgtgtttaattatgatttacctgatgataaagaggattacgttcatcgt
attggtagaacgggtcgggcaggggagagcggccattcaattagttttgcttgcgagcgt
tatgcggttaatttgcctgcaattgaagagtatattgggcatcagattcctgtgagtcaa
tacgacaaggaatccttactgactttaccgaaagtgaaccgctcaagaagtaaaaaaacg
ttcttggcaaaaacgaaaaagaatagccgtaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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