KEGG   Manis javanica (Malayan pangolin): 108387879
Entry
108387879         CDS       T06054                                 
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
  KO
K10628  V(D)J recombination-activating protein 1 [EC:2.3.2.27]
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv04068  FoxO signaling pathway
mjv05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    108387879 (RAG1)
 09160 Human Diseases
  09163 Immune disease
   05340 Primary immunodeficiency
    108387879 (RAG1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mjv04121]
    108387879 (RAG1)
Enzymes [BR:mjv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108387879 (RAG1)
Ubiquitin system [BR:mjv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108387879 (RAG1)
SSDB
Motif
Pfam: RAG1 RAG1_imp_bd zf-RAG1 zf-C3HC4 zf-C3HC4_2 zf-RING_6 zf-RING_2 zf-RING_10 zf-RING_UBOX Ribosomal_L34e zf-C3HC4_4
Other DBs
NCBI-GeneID: 108387879
NCBI-ProteinID: XP_017501745
Position
Unknown
AA seq 1043 aa
MAVSWPHTLGLSSAPDEIQHPHIKFSEWKFKLFRVRSFEKAPKEAQMEKKDSSEGKPSLE
QSPAVLDKAGGQKPTLTQPALKVHPQFSKKFHEDGKARDKAIHQANLRHLCRICGNSFTT
DGHNRRYPVHGPVDSKTQVLLRKKEKRVPSWPDLIAKVFQIDVKADVDWIHPTEFCHSCW
NIMHRKLSSAPHEVYFPRNAAMEWHPHTPSCNVCHTTLRGLKRKGHQPNVQLSKKLKTVA
DQERRAHQCKKRARKRISSKGVTKKISNCSNIHLSTKLLAVDFPKHFVKSISCQICEHIL
ADPVETSCKHVFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLSILNSLMVKCPA
KECNEEVSLEKYNHHVSQHKESKETFVHINRGGRPRQHLLSLTRRAQKHRLRELKLQVKT
FADREEGGDVKSVCLTLFLLVLRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPALKNVSSSTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGMKAQDLDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPVVPEKAVRFSFTVMQITIARGSQNVKVFEEAKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSELMLEMGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHAENLERYEVWRSNPYHESAEALRDRVK
GVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPAEERHEALRELMDLYLKMKPVWRSSC
PAKECPEFLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPELIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHDALKNSGLNVN
SQASLGDPLDLEDSLETQDAMEF
NT seq 3132 nt   +upstreamnt  +downstreamnt
atggctgtttcttggccacacaccctgggactaagttctgccccagatgaaatccagcac
ccacatattaaattttcagaatggaaatttaagctattcagggtaagatcctttgaaaag
gcacccaaagaagctcaaatggaaaagaaagattcctcggaggggaaaccctctctagag
caatctccagctgtgctggacaaggctggtggtcagaagccaaccctaactcaaccagca
ctaaaggtccaccctcagttttcaaagaaattccatgaggatggaaaagcgagagacaaa
gcaatccaccaggctaaccttcgacatctctgccgcatctgtgggaattcttttactacc
gatgggcacaataggagatatccagtccatgggcctgtggatagtaaaactcaagtcctt
ttacgaaagaaggaaaagagagtcccttcctggccagacctcattgccaaggttttccag
atcgatgtgaaggcagatgttgactggatccaccccactgagttctgccattcctgctgg
aacatcatgcacaggaagcttagcagtgccccacatgaggtttactttccaaggaacgca
gccatggagtggcacccccacactccatcctgtaacgtctgccacaccacccttcgggga
ctcaagaggaagggtcatcagccaaatgtgcagctcagcaagaaactcaaaactgtggct
gaccaagaaagacgagctcatcagtgcaagaagagagctcggaaaaggatcagcagcaag
ggagtgacgaagaagatctccaactgcagtaatatacatcttagcaccaagcttcttgca
gtggatttcccaaaacactttgtgaaatctatatcctgccagatttgtgaacacattctg
gctgatcctgtggagactagctgtaagcatgtattttgcaggatctgcattctcagatgc
ctcaaagtcatgggtagctattgtccctcttgccgctatccttgcttccctactgacctg
gagagtccagtgaagtcctttctgagcatcttgaattccctgatggtaaaatgtccagct
aaagagtgcaatgaggaggtcagcttggaaaaatataatcaccatgtctcacagcacaag
gaatcaaaagagacttttgtgcatattaatagagggggccggccccgccagcatctcctg
tcactgacccggagggctcagaagcaccgcctgagggagctcaagctgcaagtcaagact
tttgctgacagagaagaaggtggagatgtgaagtctgtgtgcctgaccttgttcctgctg
gtgctgcgggcgaggaatgagcacagacaagccgatgagctggaggccatcatgcagggc
cggggctctggcctgcagccagctgtgtgcttggccatccgtgtcaacaccttcctcagc
tgcagtcagtaccataagatgtacaggactgtgaaagccatcaccgggaggcagattttt
cagcctttgcacgccttacggaatgccgagaaagtccttctgccaggctaccaccccttt
gagtggcagccagctctgaagaatgtgtcttccagcactgacgtcggcattattgatgga
ctgtctggactgtcctcctctgtggacgattacccagtggacaccatagccaagcggttc
cgctacgattcagctttggtgtctgctttgatggacatggaagaagacatcctggaaggc
atgaaagcccaagatcttgatgactacctgaatggccccttcactgtggtggtgaaggag
tcttgtgatggaatgggagatgtgagtgagaagcacgggagtggaccagtagttccggaa
aaggcagttcggttttcattcacagtcatgcaaattaccatagcacgtggctcacagaat
gtgaaggtgttcgaagaagccaaacctaactctgaactgtgttgcaagcccctgtgcctc
atgctggcagatgaatctgaccacgagaccctgacggccatcctgagccctctcattgcc
gagagggaggccatgaagagcagtgaattaatgctggagatgggaggcatcctccggact
ttcaagttcatcttcaggggcaccggatatgatgagaaactggtccgggaagtggaaggc
ctggaggcttctggctcagtctacatctgtactctatgcgacgccacccgcctggaagcc
tctcaaaatcttgttttccactccatcaccagaagccacgcggagaacctggagcgttat
gaggtctggcgttccaacccgtaccatgagtctgccgaagcactgcgggatagggtgaaa
ggggtctctgccaaacccttcattgagacagtcccttccatcgacgctctccactgtgac
atcggcaatgctgctgagttctacaagattttccagctagaaataggggaggtgtataag
aatcccaatgcctccaaggaggaaaggaaaagatggcaggctaccttggacaagcatctc
cggaagaagatgaacctgaaaccaatcatgaggatgaatggcaactttgccaggaagctc
atgaccaaagagacggttgaagcagtctgtgaactaattcccgctgaggagaggcacgaa
gccctgagggagctgatggacctttacctgaagatgaaacccgtatggagatcatcatgc
cctgctaaagagtgcccagaattcctctgccagtatagtttcaattcacagcgctttgct
gagctcctttctactaagttcaagtacagatatgagggcaaaatcaccaattattttcac
aaaaccttggcacacgtcccagaacttattgagagggatggctctattggggcatgggca
agtgagggaaatgagtctggcaacaaactgttcaggcgcttccggaaaatgaatgccagg
cagtccaagtgctatgaaatggaagatgtcttgaaacatcactggctatatacctccaaa
tacctgcagaagtttatgaatgctcatgatgcattaaaaaactctgggcttaacgtaaac
tcacaggcaagcttaggggatccattagacctagaggactctctggaaactcaagatgca
atggaattttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (23)   

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