KEGG   Mycobacterium liflandii: MULP_04362
Entry
MULP_04362        CDS       T02444                                 
Symbol
deaD
Name
(GenBank) cold-shock DEAD-box protein, DeaD
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
mli  Mycobacterium liflandii
Pathway
mli03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mli00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MULP_04362 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mli03019]
    MULP_04362 (deaD)
   03009 Ribosome biogenesis [BR:mli03009]
    MULP_04362 (deaD)
Enzymes [BR:mli01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MULP_04362 (deaD)
Messenger RNA biogenesis [BR:mli03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     MULP_04362 (deaD)
Ribosome biogenesis [BR:mli03009]
 Prokaryotic type
  rRNA helicases
   MULP_04362 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_19 HEM4 UvrA_inter CMS1 B_solenoid_dext
Other DBs
NCBI-ProteinID: AGC63932
UniProt: L7VCM7
Position
complement(4761101..4762816)
AA seq 571 aa
MANPENPPAVPPATFADLQIHPSVMRAIADVGYESPTGIQAATIPALMAGSDVVGLAQTG
TGKTAAFAIPILSKIDTTSTATQALVLAPTRELALQVAEAFSRYGAHLSRLNVLPVYGGS
SYAIQLAGLRRGAQVVVGTPGRVIDHLERRTLDLSRVDYLVLDEADEMLTMGFAEDVERI
LSETPEYKQVALFSATMPPAIRKITTRYLHDPLEVKSEAKTATAENISQRYIQVAGPRKM
DALTRVLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTITALRD
GGIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALLFVSPRE
RHLLKLIEKATRQTLTEAELPTVEDVNAQRVAKFADSITHALSNTGIELFRRLVEDYERE
HNVPMADIAAALALQSRDGEEFLLAPDPPPDQRERHPRNERKERPERRRSGGAFSTYRIS
VGKRHKVGPGAIVGAIANEGGLHRSDFGHITIGPDFSLVELPVKLPRETLKKLEQTRISG
VLINLRPDRPADKAYKARRNDGGKPRRKRLG
NT seq 1716 nt   +upstreamnt  +downstreamnt
atggccaaccccgaaaacccgcctgcggtaccccctgccaccttcgccgacctacagatt
catccgtcggtcatgcgagcaatcgccgacgtcggttacgagtccccgacggggattcag
gctgcgaccatccccgcgctgatggcgggttccgacgtggtggggctggcgcagaccggc
accggcaagacggcggcgttcgcgatcccgattctgtcgaaaatcgacaccaccagcacc
gcaacccaggcgctcgtgctggcccccacccgcgagctggcccttcaggtggctgaggcg
tttagtcggtacggcgcccatctatcgcgcctcaacgtgcttccggtttatggcgggtcg
tcgtatgccatacaactggccggtctgcggcgcggcgcgcaggttgtggtggggacaccc
gggagggtcatcgaccacctggaacgacgaacgcttgatctgtcccgggtggactacttg
gtgctcgacgaggcagacgagatgctcaccatgggcttcgccgaagacgttgaacgcatc
ctgtccgaaaccccggaatacaagcaggtcgcattgttctcggcgaccatgccgccggca
atccgaaaaatcaccactagatatctgcacgatccgctggaagtcaaatccgaagcgaaa
accgctaccgccgaaaatatttcgcagcggtacatccaggtggccggtccgcgcaagatg
gatgcgcttacccgggtgctcgaggtcgagccgtttgaggcgatgatcgtgtttgtccgc
accaaacaggccaccgaggaggttgccgagaagctgcgggcacgagggttttccgcggcg
gccatcaacggcgatattccgcagggacagcgcgagcgaaccatcacggcgctgcgcgac
ggcggcatcgacatcctggtcgccactgacgtggccgcgcgcgggctggacgtcgagcgg
atatcgcatgtgctcaactacgacatcccgcacgacaccgagtcctacgtgcaccgaatt
gggcgcaccggtcgggccgggcgttcgggtgcggcattgttgtttgtctccccgcgggag
cgacacctgctcaaactgatcgaaaaggccactcggcaaacactgaccgaggccgagttg
cccaccgtggaagacgtcaacgcccagcgggtggcgaagtttgccgattccatcacccac
gcgctgagcaatacgggcatcgagttgttccgcaggctggtcgaggactacgagcgcgag
cacaacgtcccgatggctgacatcgctgcggcgctggcattgcagtcgcgcgacggcgag
gaattcctgctggcgcccgatccgccaccagatcagcgcgagcgccatccccgcaatgag
cgcaaggaacgtccggagaggcgcagaagcggcggcgccttcagcacgtatcgcatctcg
gttggcaaacggcacaaagtcggtccgggcgcgatcgtcggcgccatcgccaacgagggc
gggttgcaccgcagcgacttcggccacatcactatcgggccggatttctcgctggtggag
ctgccggtcaaactgccccgcgaaacactgaaaaagctcgaacaaaccaggatttcgggt
gtgttgatcaaccttcgccccgaccgccccgccgataaggcgtacaaggcgcgccgcaac
gatggtggcaaacctcggcggaaacgcctcggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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