KEGG   Methylomonas methanica: Metme_2014
Entry
Metme_2014        CDS       T01511                                 
Name
(GenBank) conjugative coupling factor TraD, SXT/TOL subfamily
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
mmt  Methylomonas methanica
Brite
KEGG Orthology (KO) [BR:mmt00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mmt02044]
    Metme_2014
Secretion system [BR:mmt02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   Metme_2014
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87 T4SS-DNA_transf FtsK_SpoIIIE AAA_22 AAA_10
Other DBs
NCBI-ProteinID: AEG00424
UniProt: G0A594
Position
2209094..2211148
AA seq 684 aa
MKSQYPVEALLRPPVELWSAVCAFACALLAGLAPWAIMMTPSVGYATAGLLTLLGLARTR
QALFVLRYQRNMRKLPRYEIAAQDIPVSRQRLFLGKGFLWQQKHTQRLRDTLHPKVRRYI
EPSFAYQLARRLERRWESSPTLQPLTKLMQSPAWWNPVAPLPPVGGKPQIHAVELEEQPV
SMDLRERVGHTLVLGTTRVGKTRLAELLITQDIARGDTVIVFDPKGDADLMKRMVAEAKR
AGRSRHLYLFHLGYPEISSRYNAIGNFSRITEVATRLTNPLPSTGNSAAFREFAWRFTNM
IAVALVKMGKRPDYKLITRYITHIEPLLTEYYRQWLPDVAPPDWEQQVQRIAASINERDL
PFALKGRSPEVIALVRYVKDNGFYDAVADGLRSAFEYDKTYFDKIVASLLPLMEKLITGK
TAALISPDYTDIADTRPIIDWRQIIRRQGIVYVGLDALSDMAVASAVGNSMFADLVSVSG
EIYKHGTDHGLPDAVKTHELPTISLHADEFNELIGDEFIPLLNKAGGSGFQVTAYTQTWS
DVEARIGNKAKAGQVAGNFNTLIMLRVKELATAEMLTNQIDTCNISTLMEVSGVNDSADP
NSPIDFTSQNQDRISVTEMPMISPATVMALPKGQAFALLEGGNLWKIRIPLPTKANDALL
PKNLQEVAHEMQRRYLTNDHWWAG
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgaagtcccagtatccggtcgaagccttgctgcggccgccggtcgaactgtggtcggcg
gtttgtgccttcgcttgtgcgttgctggccggcctggcgccgtgggctatcatgatgacg
ccatcggtgggttatgccacggctggcttattgacgctgctcggtttggctagaacccgg
caagcgttattcgtcttgcgctatcaacgcaacatgcgcaagctgccacgttatgaaatc
gcagcccaagacattccggtcagccgccagcgtttgtttttgggtaaaggctttttgtgg
cagcaaaaacacacccaacggttgcgcgataccttgcatcctaaggtgcggcgctatatc
gaaccgtcctttgcctatcaactggcccggcgtttggagcgccgctgggaatcatcgcca
acgttgcagccgttgaccaaactgatgcaaagcccagcctggtggaacccggtcgcgccg
ttaccgccggtcggcggcaaaccgcagattcatgcggtggaactcgaagaacagccggtc
agtatggatttgcgcgaacgggtcgggcataccctggtgctgggcactacccgggtcggc
aaaacccggctggccgaactcttgatcacgcaggatatcgcccgcggcgataccgtgatc
gtgttcgatccgaaaggcgatgccgatctgatgaaacgcatggtcgcagaagccaaacgc
gccggtcgcagtcggcatctgtatctcttccatctgggctatccggagatttccagccgc
tataacgccatcggcaatttctcccgcatcaccgaagtcgccacccgcttgaccaacccc
ttgcccagcactggcaattcggcggcgttccgtgaattcgcctggcgctttaccaatatg
atcgccgtggcgctggtcaaaatgggcaaacgcccggattataaattgatcacccgctac
atcacccatatcgagccactgttgaccgaatactaccggcaatggctgcccgacgtggcg
ccgccggactgggaacaacaggtacagcgcatagccgcttccatcaacgaacgcgattta
ccctttgcgctaaaaggccgatcgccggaagtgattgccctggtacgctatgtcaaagac
aatggcttttacgatgccgtcgccgatggcctgcggtcggcgttcgaatacgacaagacc
tatttcgataaaatcgtcgcatccttattgccgttgatggaaaaactgattaccggcaaa
accgcggcgctgatctcgccggactacaccgacatcgccgacactcggcccatcatcgac
tggcggcaaatcattcgccgtcaaggcatcgtctatgtcgggctggatgccttatcggat
atggcggtagcatccgcagtcggcaattccatgtttgccgatctggtctccgtttccggc
gaaatctacaaacacggcaccgaccacggtctgccggatgcggtaaaaacccatgagctg
ccgacgatttccttgcatgccgacgaattcaacgaattgatcggcgacgagtttattccc
ttgctcaacaaggccggcggctcggggtttcaagtcacggcctatacccaaacctggtcg
gatgtggaagcccgcatcggcaacaaggccaaagccgggcaggtggccggcaacttcaat
accctgatcatgctgcgggtcaaagaactggccaccgccgaaatgctcaccaaccaaatc
gacacctgtaacatcagcacgctgatggaagtatccggcgtcaacgattcggccgatccc
aattcccccatcgattttacctcgcaaaaccaggaccgcatttccgtcaccgaaatgccg
atgatttcaccggccaccgtgatggccttacccaaaggccaggccttcgccttgctggaa
ggcggcaatctgtggaaaattcgcatcccgttgccaactaaagccaacgatgcgctgttg
ccgaaaaacctgcaggaggtggcccatgaaatgcagcgccgctatctgaccaacgaccac
tggtgggcaggctga

  All links  
Gene (13)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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