KEGG   Mus musculus (house mouse): 100861880
Entry
100861880         CDS       T01002                                 
Symbol
Alyreffm11, Gm21293
Name
(RefSeq) Aly/REF export factor family member 11
  KO
K12881  THO complex subunit 4
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03013  Nucleocytoplasmic transport
mmu03015  mRNA surveillance pathway
mmu03040  Spliceosome
mmu05014  Amyotrophic lateral sclerosis
mmu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100861880 (Alyreffm11)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100861880 (Alyreffm11)
   03015 mRNA surveillance pathway
    100861880 (Alyreffm11)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100861880 (Alyreffm11)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100861880 (Alyreffm11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    100861880 (Alyreffm11)
   03041 Spliceosome [BR:mmu03041]
    100861880 (Alyreffm11)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100861880 (Alyreffm11)
    TREX complex
     100861880 (Alyreffm11)
Spliceosome [BR:mmu03041]
 Complex C
  Other components
   EJC/TREX
    100861880 (Alyreffm11)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100861880 (Alyreffm11)
SSDB
Motif
Pfam: RRM_1 TFIIA Septin FoP_duplication EOS1 DUF6591 DDHD Presenilin
Other DBs
NCBI-GeneID: 100861880
NCBI-ProteinID: NP_001257827
MGI: 5434648
Ensembl: ENSMUSG00000091779
Position
10:103978848..103981288
AA seq 264 aa
MTTMADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRP
KQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYD
RCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGM
TRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQK
QQQQLSAEELDAQLDAYQEMMDTS
NT seq 795 nt   +upstreamnt  +downstreamnt
atgactaccatggctgacaaaatggacatgtcattggaagacatcattaagctgaccaag
atccagcaaagacgtcatgacaggcctgattcccgggtgaatcgaggcactgggtctaag
aggtataggccagctttcacccatggtggaaggaacaggctggcaccatactgcagacca
aaacaacttccagacaagtggcagcatgacctgttcattggaggcttcaggggtcaaaac
cacgtggatactggtgggaagctcttcttgtcaaatctgcacttcggagtgtcagatgct
gatattcagctactctttgctgaatttggaacgttgaagaaatctgctgtgcactatgat
cgctgtggacgaagtttagggacagcacaggtgcactttgaaaggaaagcagatgccctg
aaggctatgagagagtacaatggcgcccctttggatggccgccctatgaacatccagctt
gccacctcacagattgatagacaaggaagacctgcacaaagcaaaaataggggcggcatg
acaagaaaccctggctctggagtattaagtggtggaggcaccaagaaatggacacttgga
ggcagccagggaagagggagaggcaccatcaggaactcaaaactgcagcaacagcagcag
cagcagaagcagaagcagcagcagcagcagcagaagcagcagcagaagcagcagcagaag
cagcagcagcagctatctgcagaggagctggatgcccagctggatgcttatcaggaaatg
atggacaccagctga

  All links  
Gene (17)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

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