KEGG   Methylobacterium phyllosphaerae: MCBMB27_03288
Entry
MCBMB27_03288     CDS       T04968                                 
Name
(GenBank) ATP-dependent RNA helicase DBP4
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
mphy  Methylobacterium phyllosphaerae
Pathway
mphy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mphy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MCBMB27_03288
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mphy03019]
    MCBMB27_03288
Enzymes [BR:mphy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MCBMB27_03288
Messenger RNA biogenesis [BR:mphy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     MCBMB27_03288
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UTP25 AAA_22 CMS1
Other DBs
NCBI-ProteinID: APT32579
Position
3505086..3506636
AA seq 516 aa
MTQFTDFGLAQPVLRALSEAGYVAPTPIQAQAIPPAMEGRDLCGIAQTGTGKTAAFALPI
LHRLSLSDRRAPRRGCRVLVLSPTRELANQIAESFSDYGRHLSFTNTVVFGGVTISRQER
ALAPGVDILVATPGRLIDLIERRSLILDGVEILVLDEADQMLDLGFIHALKRIVKMLPEK
RQSLFFSATMPKNIAGLAAQYLTNPVQVAVTPVATTAERVDQQVIFVHTGAKQALLGHIL
RDPAIERVLVFTRTKHGADRVVRGLDKVGIAAAAIHGNKSQPQRERALASFKDGSCRVLV
ATDIAARGIDVEGVSHVVNFDLPNVPESYVHRIGRTARAGADGLAISFCNDEEKAYLRDI
ERVTRQKVPVAGFPEGFTPPSRQEAAEIAREEERRPERQQQRPGGGRQGQRPRQSQGRPQ
QGRPEGGRGFGGPGQGAPRQGRPQEGRADARGDGRGHAPQGRDVRADRPARPQGERPNQG
RPNRDARPQRADARPRSGGGGGEGRSIGWLERAPRS
NT seq 1551 nt   +upstreamnt  +downstreamnt
ttgacccaattcaccgatttcggcctcgcccagcccgtgctgcgggcgctcagcgaggcc
ggctacgtcgcgccgaccccgatccaggcccaggcgatcccgcccgccatggaaggccgc
gacctctgcggcatcgcccagaccggcaccggcaagaccgcggccttcgcgctgccgatc
ctgcaccgcctctcgctctcggaccgccgcgcgccgcgccgcggctgccgggtgctggtg
ctctcgcccacccgcgagctcgccaaccagatcgccgaatccttctcggattacggccgt
cacctgtccttcaccaacacggtggtgttcggcggcgtcaccatcagccggcaggagcgc
gccctggcgccgggcgtcgacatcctcgtcgccacccccggccggctgatcgacctgatc
gagcgtcgctcactgatcctcgacggcgtggagattctcgtcctcgacgaagccgatcag
atgctcgacctcggcttcatccacgccctcaagcgcatcgtgaagatgctgcccgagaag
cgccagagcctgttcttctcggcgaccatgccgaagaatatcgccggcctcgcggcgcag
tacctcaccaatccggtccaggtcgcggtgacgcccgtcgccaccacggcggagcgggtc
gaccagcaggtgatcttcgtccacaccggcgccaagcaggcgctgctcggccacatcctg
cgcgatccggcgatcgaacgcgtcctggtcttcacccgcaccaagcacggcgccgaccgc
gtcgtccgcgggctcgacaaggtcggcatcgcggcggcggccatccacggcaacaagagc
cagccgcagcgcgagcgggcgctggcgtccttcaaggacggctcctgccgggttctggtc
gccaccgacatcgcggcccgcggcatcgacgtcgagggcgtgagccacgtggtcaatttc
gacctgccgaacgtgccggagagctacgtccaccggatcggccgcaccgcccgggccggc
gcggacgggctcgccatctcgttctgcaacgacgaggagaaggcctacctgcgcgacatc
gagcgggtgacccggcagaaggtgccggtggcgggcttccccgagggcttcaccccgccg
tcccgccaggaggcggccgagatcgcccgcgaggaggagcgccggcccgaacggcagcag
cagcgtcccggcggcggccgccagggtcagcggccccggcagtcgcagggccgtccccag
cagggtcggccggagggtggccgcggcttcggcggtcccggccagggtgcgccccggcag
ggccggccccaggaaggccgggccgacgcccgcggcgacgggcggggtcatgccccgcag
ggccgcgatgtccgcgccgaccggccggcacgaccgcagggcgagcgccccaaccagggc
cgtccgaatcgcgacgcccggccccagcgggccgatgcccggccgcgcagcggcgggggc
ggcggcgagggtcgcagcatcggctggttggagcgggcgccccgctcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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