KEGG   Myxococcus stipitatus: MYSTI_05280
Entry
MYSTI_05280       CDS       T02436                                 
Name
(GenBank) ClpA/B family protein
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
msd  Myxococcus stipitatus
Brite
KEGG Orthology (KO) [BR:msd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:msd03110]
    MYSTI_05280
Chaperones and folding catalysts [BR:msd03110]
 Heat shock proteins
  HSP100
   MYSTI_05280
SSDB
Motif
Pfam: AAA_2 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 AAA_18 AAA_7 Zeta_toxin bpMoxR ResIII NACHT nSTAND3 AAA_33 TsaE ABC_tran AAA_3 Sigma54_activat ATPase_2 RNA_helicase AAA_14 NB-ARC AAA_30 AAA_19 DNA_pol3_delta2 NTPase_1 DUF815 Mg_chelatase AAA_25 TrwB_AAD_bind AAA_11 Haem_oxygenas_2 AAA_6 TniB cobW SRPRB
Other DBs
NCBI-ProteinID: AGC46560
UniProt: L7UFC1
Position
6765008..6768400
AA seq 1130 aa
MELKLPLVVASMGGRLVEAWVPTLTPRIHFVGPSLSSLRDDLALAVMERFEKESPSSVAA
YQLPPHLSLRHVEVEAETRDPEKSLHVVLKGRMGVLLEKWPRDEFWVVTPTRLPEARFAI
SSPDDLPRALARRLCAWCVEHEKEELKGVWTEVRERLELLEVDAYAPSILPRTPPRPPTP
PRRRRPQGDASKEKATPPETPEQREARRNRRRLTLVELRAVARNLSHAARDDGLERCFGR
ESLVREVADALEGREGAAVILVGPPGSGKTALVHEVVRRLTTRQDAAGQRRDVWRVDGNQ
FIAGMSYVGQWEARARGVVQELVEVGDILYVDDLASLVYAGRTANERTNVAQFLEPHLAR
GELTVLAESTPERFERVREEAPTLASLFRVVQVPDLEPRATLPALLGTLRQIESMGGGGP
APRLSPLALETLLDLQQRFVAHEAFPGKAVRLLRRVISRPGTVENDVRRFTEDDVFAAMR
AQTGLPDFVLGSAPPKPREVLERELASQVAGQPEAVTAVVDAILTLQRSLQPPDKPLATY
LFVGPTGVGKTETAKAVARTLFGSEERMVRFDMSEFVSSSSITRLLGLPGAPDGELTTAL
RTQPFCVVLFDEVEKAHPRVFDALLQFLGEGRLTDGAGRTVDARQAVVVLTSNLGVREAA
ARTGFQHATESADAHYLSAVRAFFRPEFFNRLDRVVPFRALTPSALRVVVEHALESLLSR
RGIRRGNVVVEVESQLLDLLVEQAYDPRYGARPLKRALERRLTVPLAHHLVRREGEELAR
VELFRRADDMGLSVELLTRQPPWAPEPSTATWKLPAVFRALNEVTTRVDALLATLAAAPE
SASPEESLVLGEQLERLSAEAVDIRDHELAHREFLEQEERPTKKGRAGYDHDTGGSGRQG
GLRPRPILATEPFPVSAEERLRRCLPKVVSLRDELEWLAHQLEHRESGVETRALLVEGLA
DTPAAALTAVLKALPQGLGRGVIHEERVEPDGSLAWAAHETPLPARARVRRQVVSLTAMG
LSDLLRTLEGYALVHLPREDGVRPSLVRLELLPPASEKMEDVARVVATRDAVSQRQREAR
RSDESGEQALGQVVLEGNLEKMVHLSSGQSPSDSVAWVARVLRGQRRGEH
NT seq 3393 nt   +upstreamnt  +downstreamnt
atggaactcaaactccccctggtcgtcgcctccatgggcggccgcctcgtcgaggcctgg
gtccccaccctcacgccgcgcatccacttcgtgggtcccagcctgtcctcgctgcgcgat
gacctggcgctcgccgtgatggagcgcttcgagaaggagagcccgtcgagcgtggccgcc
taccagctgccaccccacctgtcgctgcggcacgtggaggtcgaggccgagacgcgcgac
cccgagaagagcctgcacgtcgtgctcaagggccggatgggcgtgctgctggagaagtgg
ccgcgcgatgagttctgggtcgtcacgcccacccggctcccggaggcccgcttcgcgatt
tcgagccccgacgaccttccccgcgcgctcgcgcggcggctgtgcgcgtggtgcgtggag
cacgagaaggaggagctgaagggcgtgtggacggaggtccgggaacgcctggagctgctc
gaggtggatgcgtatgcgccgtccatcctgccccgcacgccgccgcgcccccccacgccc
ccgcgcaggcggcgtccgcagggagacgcgtccaaggagaaggcgacgcccccggagaca
ccggagcagcgcgaggcccgccgcaaccgtcggcggctcaccctcgtggagctgcgcgcg
gtggcacgcaacctgagccacgcggcgcgcgacgacgggctggagcgctgcttcggccgc
gagtcgctggtccgcgaggtggcggacgcactcgagggtcgtgagggcgccgccgtcatc
ctcgtgggcccgccgggctcgggcaagacggcgctggtgcacgaggtggtgcgccgactc
accactcggcaggacgccgcgggacagcgccgcgacgtgtggcgggtggacggcaaccag
ttcatcgcggggatgagctacgtgggccagtgggaggcccgcgctcgcggcgtggtgcag
gagctggtcgaggtcggagacatcctctacgtggatgacctggcctcgcttgtctacgcg
ggccgcacggccaacgagcgcaccaacgtcgcgcagttcctggagccccacctggcgcgc
ggcgagctgaccgtgctggccgagtccaccccggagcgcttcgagcgtgtgcgggaagag
gcgcccacgctcgcctcgctgttccgcgtggtgcaggtgccagacctggagccgcgcgcg
acgctgccggccctgctgggcaccctgcggcagatcgagagcatgggcggaggaggtccc
gcgccgcgcctgtctccactcgcgctggagacgctgctggacctccagcagcgcttcgtc
gcgcacgaggcctttcccggcaaggcggtgcgcctgctgcggcgggtgatttcgaggccc
ggcaccgtcgagaacgacgtgcgccgcttcaccgaggacgacgtcttcgcggcgatgcgc
gcgcagacgggcctgcctgacttcgtgctgggcagcgcgccgcccaagccgcgcgaggtc
ctggagcgggagctggcctcgcaggtcgcggggcagccggaggccgtcaccgccgtggtg
gacgccatcctcaccctccagcgctcgctgcaacctcccgacaagccgctggccacctac
ctcttcgtcggccccaccggcgtgggcaagacggagacggccaaggccgtggcgcgcacc
ctcttcggcagcgaggagcggatggtgcgcttcgacatgtcggagttcgtgtcctcctcc
agcatcacccggctcctgggcctgcccggtgcgccggatggcgagctgaccacggcgctg
cgcacccagcccttctgcgtggtgctgttcgacgaggtggagaaggcccaccctcgcgtc
ttcgacgccctgctccagttcctcggtgaaggccggctgacggatggcgcgggccgcacc
gtggatgcgcggcaggcggtggtggtcctcacctcgaacctgggcgtgcgcgaggccgcc
gcccgcacgggcttccagcacgccaccgagagcgccgacgcgcactacctctccgcggtc
cgcgccttcttccgtccggagttcttcaaccgactggaccgcgtggtgcccttccgtgcg
ctgacgccttccgcgctgcgcgtcgtcgtggagcacgccctcgagtcgctcctgtcccgt
cgaggcatccgccgaggcaacgtcgtcgtggaggtggagtcgcagttgctcgacctgctg
gtggagcaggcctatgacccgcgctacggcgcccgtcccttgaagcgcgccttggagcgc
cgcctcacggtgccgctggcgcatcacctcgtccggcgcgagggcgaggagttggcccgc
gtggagctgttccgccgggccgatgacatgggcctgtcggtggagctgctcacccggcag
cccccatgggcgcctgagccgtccaccgccacctggaagcttcccgcggtgttccgcgcg
ctgaatgaagtgaccacgcgcgtggacgccctgctcgcgacgctcgcggcggcgcctgaa
tccgcgagccccgaggagtccctggtcctgggtgagcaactggagcgcctgtccgccgag
gccgtggacatccgcgaccacgagctcgcgcaccgtgagttcctggagcaggaggagcgc
cccaccaagaagggccgcgcgggctacgaccacgacaccggggggtcggggcggcagggc
gggttgcggcctcggcccatcctcgccacggagccctttcccgtgtccgccgaggagcgg
ctgcgtcgctgcctccccaaggtggtgagcctgcgcgatgagctggagtggctggcccat
cagctcgagcaccgggagtccggcgtagagacgcgcgcgctgctcgtggagggactcgcg
gacacgcccgcggccgcgctgacggccgtgctgaaggccctgccccaaggactgggccgc
ggggtgattcacgaggagcgcgtggagcccgacgggagcctcgcgtgggcggcgcacgag
acgccccttcccgcccgagcccgggtccggcgccaggtggtgagcctgacggcgatgggc
ctgagcgacctcctccggacgctggagggctacgcgctggtgcaccttcctcgggaagac
ggcgtgaggccctcgctggtccgcttggagctgttgccgcccgcatcagagaagatggaa
gacgtcgcgcgggtggtggcgacccgcgacgccgtgagtcagcggcagcgcgaggcacgt
cgctcggacgagtccggcgagcaggccctgggacaggtcgtcctggagggaaacctcgag
aagatggttcatctgagcagcgggcaatccccctcggactccgtcgcctgggtggcgcgg
gtgctgcgcggccagcgccgaggagagcactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (36)   
   Pfam (36)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system