KEGG   Candidatus Nucleicultrix amoebiphila: GQ61_02945
Entry
GQ61_02945        CDS       T04833                                 
Name
(GenBank) hypothetical protein
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
naf  Candidatus Nucleicultrix amoebiphila
Pathway
naf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:naf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    GQ61_02945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:naf03400]
    GQ61_02945
Enzymes [BR:naf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GQ61_02945
DNA repair and recombination proteins [BR:naf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GQ61_02945
SSDB
Motif
Pfam: DEAD PriA_C PriA_3primeBD ResIII Helicase_C PriA_CRR ATPase_2 PolC_DP2 Microtub_bd zinc-ribbons_6
Other DBs
NCBI-ProteinID: ARN84451
UniProt: A0A1W6N3U8
Position
complement(592263..594254)
AA seq 663 aa
MNSQKETFQGRIQVLLPVPLDNSFDYTTEQPLCLGDFVQVPFGKKKLWGVVWSQQAVFES
NVKTVIAKSTLPPLSDLMRQYIEWVADYIVAPRGAVLKMVMNLPAVFNEPKRARKKFQFS
NNFSYRSPDLSEDQERVVVEIKQYINAQPYSVSLIDGVTGSGKTEVYFEIIAEKLSDGGQ
VLILLPEISLGPQWFQRFKERFGVEPAQWHSDLTPAQRRETWLAIQRGEAQVVVGARSAL
FLPYANLKMIVVDEEHEQAFKQEEGVIYHARDMAIARAHMEQIPILLASATPSLETIDNC
ERHRYKRFYLPERFGDACFPSITTVDMRTEGTRGNHNWLSSTLSEAIKQTVERSEQVLLF
LNRRGYAPLTLCRKCGARVTCPHCTAWLVEHKKPPRMECHHCGHTANILKSCDACSAEED
FVACGPGVERLEEEIKKRFPNLRCLIMASDRVTTSKMLNEAIAKIQQHEVDIVIGTQMMA
KGHHFPKLTLVGVIDADLGLAGGDLRASEKTFQLLHQVSGRAGRAEYKGSVVIQTYQPEH
PVMQALLEHDRDKFIAFEQESRKLFHMPPYGRLVAVVFSGTDGLLVERTARSFVLKAPLH
DQFEILGPARAPLAVIRGRHRWRILIKGPKELSVQKLLKFWLKGFDCPASIKLSIDVDPY
SFL
NT seq 1992 nt   +upstreamnt  +downstreamnt
gtgaatagccaaaaggaaacatttcaaggcagaatacaagttttgttgcctgttcccctt
gataactcctttgattatacaactgaacaacctctttgtttaggggattttgttcaagta
ccttttggtaaaaagaaattgtggggagttgtttggtctcagcaagctgtatttgaaagt
aatgttaaaacagtgattgcaaaatctactctcccccccctgtctgatttgatgagacag
tatattgagtgggtagcagactatatcgtggcgcccagaggtgctgttcttaaaatggtc
atgaatcttcccgctgtgttcaatgaacctaaaagagcgcgtaaaaaatttcaattttct
aacaatttttcatatagatcccctgatctttctgaagatcaggaaagagttgtcgttgaa
attaaacaatatattaacgcacaaccttatagtgtttctttgatcgatggtgtaacgggg
tcaggtaaaacagaagtatattttgaaattattgccgagaaattgtctgatggaggacaa
gtactcattcttttacctgaaatttctttaggccctcaatggttccaacggtttaaagaa
cgttttggtgtggagcctgcacaatggcattctgacttaacacctgctcaacgtcgagag
acttggcttgcaattcaacggggagaagctcaagtagtcgttggcgcgcgatcagccctg
tttttgccctatgcaaatttaaagatgattgtagtagatgaggagcatgaacaggctttt
aagcaagaagaaggagtgatctatcatgcgcgagatatggcaattgcgcgtgctcatatg
gaacagatcccaattcttttggcatcagctacgccatctcttgaaacaatcgataattgt
gaacgtcatcgatataagagattttacttgcctgaacggtttggtgatgcttgtttccca
agtattacaaccgttgatatgcgtactgaaggtacaagaggtaatcacaattggctttct
tctaccctatcagaagctataaaacaaacagtagagcgaagtgagcaggttttgctattt
ttaaatcgacgtggatatgcgcctcttactttgtgtcgaaaatgtggagccagagttact
tgtcctcattgtacggcttggctcgtggagcataagaaaccgcctcggatggaatgccat
cattgtggccatactgcgaacattctaaagagttgtgatgcctgcagtgcagaagaagac
tttgttgcttgtggccccggtgttgaacgattagaagaggagatcaagaaacgttttcct
aatttgcgatgcttaattatggcgagcgatcgagtaacgacatcgaaaatgttgaatgag
gcaattgcaaaaattcagcaacatgaagttgacatagtgataggtactcaaatgatggcc
aaaggtcaccatttccctaaactgacgcttgttggtgtcatagacgcagatttggggttg
gcaggaggagatttaagagccagcgaaaagacttttcagctccttcatcaagtttcagga
agagctgggcgtgcggaatataagggaagtgttgtaattcaaacttaccaaccagaacat
cctgtcatgcaggctctgcttgagcacgatcgcgataagtttattgcgtttgaacaagaa
agcagaaagctttttcatatgcctccctatggacgccttgttgctgtcgttttttcaggc
actgatggacttcttgttgagagaacggccagatcatttgttttaaaggcgcctctccat
gatcagtttgaaattttaggaccagcacgagcacctttagccgttattcgtggacgacat
cgttggcgcattttgatcaaaggaccaaaggaactgagtgttcaaaaattattgaaattt
tggttaaaaggttttgattgtcccgcaagtatcaagttgtctatcgatgttgatccttat
tcatttttatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (87)   
   KEGG ORTHOLOGY (1)   
   RefGene (84)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (104)   

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