KEGG   Necator americanus (New World hookworm): NECAME_07406
Entry
NECAME_07406      CDS       T04867                                 
Name
(RefSeq) spliceosome RNA helicase BAT1
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
nai  Necator americanus (New World hookworm)
Pathway
nai03013  Nucleocytoplasmic transport
nai03015  mRNA surveillance pathway
nai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NECAME_07406
  09122 Translation
   03013 Nucleocytoplasmic transport
    NECAME_07406
   03015 mRNA surveillance pathway
    NECAME_07406
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nai03019]
    NECAME_07406
   03041 Spliceosome [BR:nai03041]
    NECAME_07406
Enzymes [BR:nai01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     NECAME_07406
Messenger RNA biogenesis [BR:nai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     NECAME_07406
Spliceosome [BR:nai03041]
 Complex C
  Other components
   EJC/TREX
    NECAME_07406
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    NECAME_07406
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1
Other DBs
NCBI-GeneID: 25347436
NCBI-ProteinID: XP_013305624
UniProt: W2TQU2
Position
Unknown
AA seq 432 aa
MFQISVMDDEQLLDYEEEQEETHEAKAAENGAGDAKKIKGNYASIHSSGFRDFLLKPELL
RAIIDCGFEHPSEVQHECIPQAILGMDIVCQAKSGMGKTAVFVLATLQQLEPVDGEVSVL
VMCHTRELAFQISKEYERFSKYLSAIKVAVFFGGMPIKKDEELLRTNCPHIVVGTPGRTL
ALARSGKLKLDKIKYFVLDECDKMIGDADMRRDVQEIVKMTPQEKQVMMFSATLPKELRI
VCKKFMQDPMEVYVDDEAKLTLHGLQQHYVKLKETEKNRKLLELLDLLEFNQVVIFVKSV
QRCGALHQLLSEQNFPSIAIHRQMPQEERLARYQAFKDFQKRILVATDLFGRGMDIERVN
IVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDEVDAKTLNSVQDRFDISITELPDT
IDVSTYIEGRTN
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgttccagatatcagtcatggatgacgagcagctcctcgattacgaagaagaacaagaa
gaaactcatgaggctaaggctgctgagaatggtgctggtgatgcgaagaagataaagggc
aattacgcatctattcatagtagtggatttcgtgacttcctgctcaagccggaacttcta
cgtgctataattgattgcgggtttgagcatccttctgaagttcaacacgagtgcattcct
caagctatattgggaatggatattgtttgtcaagcgaaatctggtatgggtaaaactgct
gtcttcgttttggcaacgcttcagcagttagaaccagttgatggggaagtttctgtgtta
gtaatgtgccacactcgcgaattggcgttccaaatatcaaaggagtatgaacgctttagc
aagtacttgtcagctatcaaggtggctgtattttttggtggtatgccaatcaagaaggat
gaggagttgctgcgcacaaattgtcctcatatagttgtggggacaccgggccgtaccctc
gcattagccagatctggaaagctaaaacttgacaagataaagtatttcgtcctggatgaa
tgtgacaaaatgatcggagatgcagatatgcgacgtgatgtgcaggagattgtgaagatg
acaccgcaggaaaagcaagtgatgatgttctccgccactcttccgaaggagctgcgcatc
gtctgcaagaagtttatgcaagatccaatggaggtgtatgtagacgatgaagcgaaacta
actttgcacgggcttcagcaacattatgtaaaactcaaggagactgagaaaaacagaaag
ctccttgaactccttgatctacttgagttcaaccaggtcgtaattttcgtgaagtctgta
caacgctgtggcgcacttcaccagttgttatccgagcaaaactttccatcgattgcgatt
cacaggcagatgccgcaggaggaacgcctcgctcgttatcaagcttttaaagactttcag
aaacgtattctagtagccactgatttgtttggacgtgggatggacattgagcgagttaac
atcgtgttcaactatgacatgcccgaggattcggactcttaccttcatagagttgcacgt
gctggaaggttcggtactaaaggtctggctatcacctttgtgtcagacgaagtggatgcg
aaaacactaaacagcgttcaggataggtttgacataagcatcacagaactcccggataca
atagatgtgtcaacttacattgaaggaagaacgaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (137)   
   KEGG ORTHOLOGY (1)   
   RefGene (133)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (154)   

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