KEGG   Osmia bicornis bicornis (red mason bee): 114878364
Entry
114878364         CDS       T06109                                 
Name
(RefSeq) ATP-dependent RNA helicase WM6 isoform X1
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
obb  Osmia bicornis bicornis (red mason bee)
Pathway
obb03013  Nucleocytoplasmic transport
obb03015  mRNA surveillance pathway
obb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114878364
  09122 Translation
   03013 Nucleocytoplasmic transport
    114878364
   03015 mRNA surveillance pathway
    114878364
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obb03019]
    114878364
   03041 Spliceosome [BR:obb03041]
    114878364
Enzymes [BR:obb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     114878364
Messenger RNA biogenesis [BR:obb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     114878364
Spliceosome [BR:obb03041]
 Complex C
  Other components
   EJC/TREX
    114878364
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114878364
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1
Other DBs
NCBI-GeneID: 114878364
NCBI-ProteinID: XP_029047941
Position
Unknown
AA seq 424 aa
MADNDDLLDYEDEEQTEQVVDGSGDIPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcggacaatgatgatcttttggattatgaagatgaggaacaaaccgaacaagtagtc
gatggaagcggggacatacctgctaagaaagaagttaaggggacatatgtatctattcac
agtagtggatttagggattttcttctgaaacctgaaatattacgtgcaattgttgactgt
ggttttgaacatccttctgaagtacagcatgaatgtattcctcaagcagtgcttggcatg
gatatattatgtcaagcaaaatctggtatgggaaaaacagctgtatttgtattagcaaca
ctgcaacaattagagttaactgaaaatcaagtttatgttcttgtaatgtgccacacgcga
gaacttgcttttcaaattagcaaggaatatgaaagatttagcaagtacatgcctcatgta
aaggttggagtattctttggtggcttgccaattcaaaaagacgaagaagtattaaagaac
acatgccctcatattgttgtgggtacaccaggtcgtatcctcgctctcgtacgaaataaa
aaattaaacctaaagcatttgaaacactttattcttgacgagtgtgataaaatgcttgaa
ttgttagacatgcgtagagatgtacaggaaatatttagaagcactccacacggcaagcaa
gtcatgatgttcagcgctacattgtccaaggagatacgtcctgtctgcaaaaaatttatg
caagatcccatggaagtctatgtggacgatgaagcgaagctcacattacatggtctacaa
cagcattatgtgaaactaaaagaaaatgaaaagaacaagaagctatttgaattacttgat
gttcttgaatttaatcaggttgttatctttgtaaaatctgtacaaaggtgtatggctttg
gcacaactattgaccgaacaaaattttcccgccattggtattcatagaggaatgactcaa
gaagaacgattatcgagataccagcagttcaaagattttcaaaaaagaattcttgtagct
acaaatttgttcggacgtggcatggatatcgaacgtgtaaatatagtattcaattatgat
atgccagaagattcggacacatacttacatcgtgtagctagagctggtcgttttggtact
aagggtcttgcaattacattagtcagtgatgaaagtgacgctaaaatattaaatgacgta
caagaacgatttgatgttaatatcacagaattaccggatgaaatagatttagcttcatat
attgaaggacgataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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