KEGG   Osmia bicornis bicornis (red mason bee): 114882835
Entry
114882835         CDS       T06109                                 
Name
(RefSeq) probable ATP-dependent RNA helicase spindle-E
  KO
K18408  ATP-dependent RNA helicase TDRD9 [EC:5.6.2.5]
Organism
obb  Osmia bicornis bicornis (red mason bee)
Brite
KEGG Orthology (KO) [BR:obb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:obb03036]
    114882835
Enzymes [BR:obb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.5  RNA 5'-3' helicase
     114882835
Chromosome and associated proteins [BR:obb03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    114882835
SSDB
Motif
Pfam: Helicase_C TUDOR DEAD HA2_N HA2_C AAA_19 AAA_14 AAA_11 nSTAND3 PhoH ATPase zf-met ATPase_2 ResIII AAA_7 AAA_22 NACHT
Other DBs
NCBI-GeneID: 114882835
NCBI-ProteinID: XP_029055749
Position
Unknown
AA seq 1427 aa
MDYLNLFNANATFKRKILPGPSSRRQLPKDMSLLDAKLNVNIKHIGRGTDYVKEYVQKEE
DELLESASYYNGNNQNNLELISQGTAAVQDTNIEETMKIYSTYDFAYRPKPGLTINANKN
QITSMIDTNSVVVIQGPTGCGKTTQVPQFILDSCYKKKLHCNIIVTQPRRLAAISIAKRV
SQEREWPVGSLVGYQVGLINHTSKDTRLTYCTTGVLLHKLINAKNMLEYTHVVLDEVHER
DQDMDFLLLLVRKLLRTNSRSVKVILMSATFEVDRFAKYFSSPVGNKLAPAPIVDIAKKS
YFNITSYYLCQMDGLGPLPQVSATEPSVSIKMLEFCVNLIKVLDDVDLKADDANYDPETN
TYERHVILIFLPGIHEIEEMHNILSLPKHEKAKWDIVILHSSITTEEQQRIFIKPPRGYR
RIILSTNIAESSVTVPDVKYVMDFCLTKQLIIDPKTNFQCLELKWASKVNCEQRAGRTGR
VMDGRVYRLVPEAFYETVLPREASPEMLRSPLESLVLKAKLLDMGEPKAILALSLDPPDL
SNLERTILLLKEAGALLNKVDEIQHLDGELTDLGRIMANLPVNINLAKLMMLGHVFSVLK
DTIIIAASLTVKDLFSSPFQQKLLAYDARLNWSANSCSDCVAFMTVYKVWISEKANRRIN
SDAAEKKWAWRNYVQIRVLREVKALVTELTMRLEKMGIQESVGLNKVVWKETERPFVLKI
AIAGAFYPNYFLKHNPEGQLSEYNGTKMLGGLDPSKTVYLQGWPLRQPGLLYARRIQGIF
ADNLVCSAEKIKVSFDSSSRVYVQFVNDEVAKTQYNMTKRISPFVYKAVRMRQCNIPIEI
PVLYEDVAEQQAEEMNLVRKSYFTCENFVKDKNKPVLPSIRVSRIPIVMQHLKDPGRFWV
QMYDSSIKYKLNAINSTIYKKHNLEALTEAPETGTIVIAPYEQNNCKSYFRAVVEGHVTS
PEILVQLFFIDYGYSSECRLCDLRRLRDDSDIADIPALAMECVLTHVRPSIARTLSDEWS
EAASSLFWVLVNKPGRLHGNIYSIVNCVISLELIHVNEEGEETNINQCLIDKGFAIRKEE
DYFSRFNHDLRIQHEDMVDQQCYHYEKLQYDQDFMPSIYPEPPSFNNCRSTVALRGPFSP
LEIELTHLTMAGRDKRIKMAVNSVNSVLLDTDPEDVFQRLLVAGSVSQNANGTNLTLFNT
TLMPRLPGLTALMVLIFTPYMELRRNSFGTYYIGALCGLGSEPNTKRSIFPEHDIELQFD
AEITIDDLQLINRLRHWMNIGIQINQHYESSDNMEEMIICQNRIKDALLKLIEKQRKPRT
SELINHFDKWNLYDESLLLQPSKQYMVKNNIYRLHSALDLEETNELQELTEHVKHLRSLT
IEDPRKPENTEIHCKLCKVTIVDIFDLRGHLYSKQHRQNEETLGIKV
NT seq 4284 nt   +upstreamnt  +downstreamnt
atggattatttaaatctttttaatgcaaacgctacatttaaaagaaaaatactgccagga
ccatcgagtcggaggcagttaccaaaagatatgtccttattagatgcaaaattaaacgta
aatataaagcatatagggagaggaacagattatgtaaaggaatatgtacaaaaagaggaa
gatgaacttttggagtcagcaagctactataatggaaataatcagaacaacctagaactt
atatcacaaggtacagcagctgtgcaagatacaaatattgaagaaacaatgaagatttat
tccacttatgattttgcttaccgcccaaagcctggtttaacaattaatgctaataaaaat
caaataacatctatgattgatacaaattcagtagtagtgattcaaggtccaactggttgt
ggtaaaactacacaggtgccacaatttattctagattcctgttataaaaagaagcttcac
tgcaacatcatagtcacacagcctagaagacttgctgctataagcattgcaaaacgtgtt
agtcaggaaagagagtggccagtaggtagtcttgttggatatcaagtgggtttgataaat
cacaccagtaaagatacacgtttgacatattgtacaactggtgttcttctacataaatta
ataaatgcaaaaaatatgttagaatatacccatgtggtacttgatgaagttcatgaaaga
gatcaagatatggattttctacttcttcttgttcgaaaattattacgcacgaattcacgt
tcggtgaaagtaattctgatgtctgccacatttgaagtagacagatttgccaaatatttt
tcctcacctgtaggaaacaaacttgcacctgcacctattgttgatatcgctaaaaaaagt
tattttaatattacttcttattacctttgccaaatggatggattagggccgttgcctcaa
gtttctgctactgaaccaagtgtttcaatcaaaatgttggagttttgtgttaatctaata
aaagttcttgacgacgtggatctgaaagctgatgatgcgaattatgatccagaaacaaat
acttatgaaagacacgtgatcctgatatttttaccaggtatccacgaaatcgaagaaatg
cataatatattatcattgccgaaacatgaaaaagctaaatgggatatagtaatattgcat
tcatcaattacaactgaagaacagcaacgaatttttataaaacctcctcgtggttaccgt
cgtattattttatctacaaacattgctgagagtagtgttacggtgcctgatgtaaaatat
gtaatggatttctgtttaacgaaacaacttatcatcgatccaaaaacgaattttcaatgc
ttagaattaaaatgggcaagcaaggtaaattgtgaacagagagcgggtcgtacaggtcga
gtaatggatggaagagtatacagattggtaccagaagcattttatgaaaccgtattgcca
cgagaagcgtctcctgaaatgttacgttcaccgttggaatctttagtcctaaaagcgaag
ttgttagatatgggagaacccaaagcaattttagcgctttctcttgatccacccgatctt
agtaatttagaaaggacaatattactattgaaagaagcaggcgcattgcttaacaaagtc
gacgaaattcaacaccttgatggagaactaacagatcttggtcgaatcatggcgaatttg
ccagtgaacattaatctggcaaaattaatgatgttgggtcatgtcttcagcgttttgaaa
gatacgatcattattgcagctagtctaactgtaaaagatctatttagcagtccctttcaa
cagaaattactggcatacgacgctagactcaattggtctgctaattcttgcagcgattgc
gtcgcatttatgactgtttataaagtatggatcagcgaaaaagcaaatcgtcgaataaac
agcgatgccgcggaaaagaaatgggcatggagaaattatgtacagataagagtattgcgt
gaagtcaaagcgcttgttacagaattaactatgagattagaaaagatgggaatccaagaa
agtgtcggactcaacaaagttgtttggaaagaaacagaaaggccgttcgttttgaagatt
gcaattgctggtgcattttatccgaactattttctaaaacataatcctgagggacagtta
agcgaatataatggaacaaaaatgttaggtggtttagatccatcgaaaacagtatattta
caaggttggccattaagacaacctgggcttttatatgctcgtagaattcaaggtatattc
gcagataacttagtgtgctctgctgaaaagatcaaggtatcttttgattcatccagtcga
gtatatgttcaatttgttaatgatgaagtggctaaaactcaatacaatatgacaaagaga
atatctccttttgtttacaaagctgtcaggatgaggcagtgtaatattcctatagaaata
cctgttttatacgaggatgtagccgagcagcaagcggaagaaatgaacttagttagaaaa
tcatattttacatgtgaaaattttgtcaaagataaaaataaacctgtattgccgagtata
cgagtgtctcgaattccaatagtgatgcagcatctaaaggatcctggtcgtttctgggta
cagatgtatgattcttcgataaagtataaactaaatgctataaactcaacaatctacaaa
aagcataatttagaagcactcacggaagctccagaaaccggcacgattgtgattgcacca
tatgaacaaaataattgcaaatcatattttcgggcggtagttgaaggacatgtaacatca
ccagaaatattggtccaattatttttcattgattatggttactcgagtgaatgtcgatta
tgtgatttgagacgtctaagagacgatagcgacattgctgatattccggcactggccatg
gaatgtgtgttaacccatgttcggccatccatagcgcgtacattaagtgacgagtggtca
gaagctgcatccagtctcttctgggtattagttaacaaaccaggtcgactacatggtaac
atttattccattgttaattgcgttatttcattggaacttatacatgtgaacgaagaagga
gaagaaactaatatcaatcagtgtctcattgacaagggatttgcaataagaaaagaagaa
gactacttttcacgtttcaatcatgatctaagaattcaacacgaagatatggtggaccaa
caatgttatcactatgaaaaattacaatacgatcaagatttcatgccatcgatttatccg
gaaccaccttcatttaataattgtcgttcaacggtggctttacggggtccattttcaccg
ctagaaattgaattaactcatcttactatggctggtagagataaaagaataaagatggct
gtaaattctgtaaactctgtccttttggacactgatccggaggacgtcttccagcgactt
ttagtagctgggtctgtgtcacaaaatgcaaatggcactaatttgacattgtttaataca
acactaatgccacgacttcctggattgactgctctgatggtattaattttcacaccgtac
atggaattgcgacgaaacagtttcggaacttactacattggtgcattatgcggattaggg
tctgaaccaaataccaaaagaagtatttttccagaacacgatatagagcttcaatttgat
gctgaaattaccattgatgatctacaacttataaatagactgcgtcattggatgaacatt
ggaatacaaattaaccagcattatgaaagcagtgataatatggaagaaatgattatctgt
caaaacagaattaaagatgcattactgaaattaattgagaaacaaaggaaaccacgaact
tccgaattaatcaatcattttgataaatggaacttgtacgacgaatctctgcttcttcaa
cctagtaagcaatatatggtcaagaataacatttatagattacatagtgcattggacttg
gaagaaacgaatgaactacaagaacttacggaacacgtgaaacatttacgatcattaaca
attgaggatcccagaaagccagaaaatactgaaattcattgtaaattatgcaaagttacg
atagttgacatttttgatcttcgtggacatttgtactctaagcaacacagacagaacgag
gaaacgttaggaattaaagtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (17)   
   Pfam (17)   
All databases (34)   

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