KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4352332
Entry
4352332           CDS       T01015                                 
Name
(RefSeq) ABC transporter G family member 50 isoform X1
  KO
K08711  ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:osa00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    4352332
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:osa02000]
    4352332
Transporters [BR:osa02000]
 ABC transporters, eukaryotic type
  ABCG (White) subfamily
   ABCG2, 3 subgroups
    4352332
SSDB
Motif
Pfam: ABC2_membrane ABC_tran PDR_assoc ABC2_membrane_7 AAA_21 RsgA_GTPase ABC2_membrane_3 AAA_16 SMC_N AAA_18 AAA_22 AAA_29 AAA Rad17 AAA_28 AAA_25 AAA_33 AAA_30 AAA_17 AAA_23 MMR_HSR1 AAA_5 NACHT ABC_trans_N nSTAND3 RNA_helicase GEP5 Viral_helicase1 NTPase_1 Ploopntkinase3 RuvB_N DUF815 ABC_ATPase
Other DBs
NCBI-GeneID: 4352332
NCBI-ProteinID: XP_015618069
UniProt: B9GDE5
Position
12:complement(19828478..19840216)
AA seq 1406 aa
MSSSSSHHPEFASCTANDDEHHLDEFELELVVQDVQRQQNNGSANTDQHERENLLLLDDS
SKSGALKRRLFFDNLLKNVQDDHIRFLHRQKERIDRVDVKLPAIEVRYNNLSVEAECRTA
NGDHLPSLWNSTKGAFSGLVKLLGLETERAKINVLEDVSGIIKPCRLTLLLGPPGCGKST
LLRALSGKLDKSLKVTGDISYNGYQLDEFVPEKTAAYISQYDLHIPEMTVRETLDFSSRC
QGVGRRPKILKEVSARESAAGIIPDADIDIYMKAISVEASKRSLQTDYILKIMGLEICAD
TMVGDAMIRGLSGGQKKRLTTAEMIVGPARAYFMDEISNGLDSSTTFQIISCFQQLTNIS
EYTMVISLLQPTPEVFDLFDDLILMAEGKIIYHGPRNEALNFFEECGFICPERKEVADFL
QEILSCKDQQQYWSGPNESYRYISPHELSSMFKENHRGRKLEEPIVSPKSELGKEALAFN
KYSLQKLEMFKACGAREALLMKRSMFVYVFKTGQLAIIALVTMSVFLRTRMTTDFTHATY
YMGALFFSILMIMLNGTPEISMQIRRLPSFYKQKSYYFYSSWAYAIPASVLKVPVSILDS
LVWICITYYGIGYTASVSRFFCQFLMLCFVHQSVTSLYRFIASYFQTPTASFFYLFLALT
FFLMFGGFTLPKPSMPGWLNWGFWISPMTYAEIGTVINEFQAPRWQKETIQNITIGNRIL
INHGLYYSWHFYWISIGALFGSIILFYIAFGLALDYITSIEEYHGSRPIKRLCQEQEKDS
NIRKESDGHSNISRAKMTIPVMELPITFHNLNYYIDTPPEMLKQGYPTKRLQLLNNITGA
LRPGVLSALMGVSGAGKTTLLDVLAGRKTGGYIEGDIRIGGYPKVQETFVRILGYCEQAD
IHSPQLTVEESVTYSAWLRLPSHVDKKTRSEFVAEVLETVELDQIKDVLVGTPQKNGLSM
EQRKRLTIAVELVSNPSVILMDEPTTGLDTRSAAIVIRAVKNICKTGRTVVCTIHQPSTK
IFEAFDELILMKNGGKIIYNGPIGERSSKVIEYFEKISGVLKVKSNCNPAAWMMDVTSTS
MEVQHNMDFAILYDESSQHRDIVELVEKLSIPIPNSEILSFSHRFPRNGWIQLKACLWKQ
NLTYWRSPEYNLRRIMLTVISALVYGVLFWKRAKILNDEQDLFNVFGAMYLGSTTIGSYN
HQSIIPFSTTERIVMYREKFAGMYSSWSYSFAQAAIEIPYVFIQVVLYTLIIYPSIGYYW
TTHKFIWFFYTTFCSSLSYIYVGLLLVSLTPNVQVATILASFFNTMQTLFSGFILPAPQI
PKWWVWLYYLTPTSWTLDALLTSQYGNIEKEVRAFGETKSVSIFLNDYFGFHKDKLSLVA
AVLIAFPFVLIILFSFSIEKFNFQKR
NT seq 4221 nt   +upstreamnt  +downstreamnt
atgagctcatcatcatcacaccatccagaatttgcctcttgtactgcaaatgatgatgag
caccatctcgatgagttcgagttagaattggtagtgcaagatgtgcagcggcagcagaat
aatggtagtgcaaacactgatcagcatgagcgtgagaacctgttgctgcttgatgacagc
agcaagtcgggagctctgaagaggcgtttgttcttcgacaatctgctgaagaatgtccag
gatgaccatatccgcttcctgcacagacagaaggaaagaattgacagagttgatgtcaaa
ttgccagcaatagaggtgaggtataataatctgtctgtggaagcagagtgcagaactgcg
aatggagatcatctgccgtcgctatggaatagtaccaagggagctttctcaggccttgtg
aagttgctaggcttagaaacagaaagagcaaaaatcaacgttctagaagatgtgagtgga
atcatcaaaccctgcagattgactcttctattgggacctccaggatgtggcaaaagcact
ctgttgcgagctctttctgggaaactagataagtctctaaaggtaacaggggatatctct
tacaatggctatcagcttgatgaatttgtgcctgagaaaacagccgcgtatatcagccaa
tacgatttacacattcctgagatgactgtgagggagactttggacttctcatcccggtgc
caaggtgttggaagaagaccaaaaatactcaaggaggtgagcgcgagggagagcgcggcg
gggatcatacctgatgcggacatagatatatacatgaaggctatatcagttgaagcttca
aagagaagcctacagacagactatattttgaagatcatggggctagagatatgcgcagac
acgatggttggggatgcaatgataagaggactatcaggggggcagaagaaaagattaacc
acagctgagatgattgtggggcctgcaagagcatactttatggatgaaatatcaaatggt
ctggatagctctaccacttttcaaataataagttgtttccagcaactgacgaacatcagc
gagtacaccatggttatttcacttcttcaaccaacacctgaggtatttgatctttttgat
gacctgatattaatggcagaagggaaaattatataccatggccctcgaaatgaagctctg
aatttttttgaggagtgtgggttcatatgcccagaaagaaaagaggtagctgactttctc
caagagatcttgtcctgcaaggaccaacaacagtactggtctggtccaaatgaatcttac
agatatatatcaccccatgaattatcaagcatgttcaaggaaaatcacagagggagaaaa
ctagaagaaccaattgtttctccgaaaagcgagttgggcaaggaagctttagcattcaat
aaatattctctgcaaaaactggaaatgttcaaagcctgtggagcaagggaagcactccta
atgaaaaggagtatgtttgtttatgtcttcaaaacaggccagcttgccattattgcactc
gtaacaatgtctgtgttccttcgaactcgcatgacaacagatttcactcacgcaacttac
tatatgggagcattgtttttttccatcttaatgatcatgctaaatggcacaccagagata
agcatgcagattaggagactcccaagtttttacaagcaaaagagctattatttctattct
tcatgggcatatgcaataccagcttcagtcctaaaggtccctgtttccatattagattca
cttgtatggatatgtatcacatattacggtattggttatacagctagtgtttcgaggttc
ttctgccaatttctgatgctttgttttgtccatcaatcagtcacttcgctgtatcgattt
attgcttcatacttccaaacacctactgcgtctttcttctacctttttctggctctaaca
ttcttcctcatgtttggaggcttcactcttcccaagccctccatgccaggatggttaaac
tggggattttggatttctccaatgacatatgcagaaatcggcacagttattaatgaattc
caagcgccaagatggcagaaggaaactattcaaaacataacaattgggaaccgaatcctg
attaatcatggcctatattacagttggcacttttattggatatccattggagcattgttc
ggatcaatcattttattttatatcgcttttggattggcgctagattatattacatctata
gaagaatatcatggaagtaggcctataaagaggttatgtcaagaacaggaaaaagattct
aatatacgaaaagaatctgatggtcattcaaatatttccagagcaaagatgactatacct
gttatggaacttccaattacgttccacaatctgaactactacattgataccccaccggaa
atgctgaaacaaggctatccaacaaaaagacttcaactacttaacaacataactggtgca
ttgcgtcccggtgttctttctgcactaatgggtgtcagtggagccgggaagacaactctg
ctagatgtattagcaggaaggaaaacaggaggatatattgaaggggacataagaataggt
ggatatcccaaggtgcaagaaacatttgttagaatcttaggttactgtgagcaagccgac
atacattccccacagctcacagttgaagagtctgtaacttattctgcttggcttcgtcta
ccttctcatgtcgacaaaaaaacaagatctgaatttgttgctgaagtccttgaaactgtt
gaactagatcaaataaaagatgtcttagtggggacaccacagaaaaatggattatccatg
gagcagcgaaagaggctaacaattgcagtcgagcttgtttcaaacccatcagtcatacta
atggatgaaccaacaacaggattagatacaaggtcagcagcaattgttattcgtgctgtt
aaaaatatttgcaaaacaggaaggacagtagtgtgtacaatccatcagccgagcactaaa
atttttgaggcgtttgatgagctcatactaatgaaaaatggtgggaaaataatctataac
ggaccaataggagagcgttccagcaaagtgattgagtactttgagaaaatttctggggtc
ttgaaagtaaagagtaactgcaatccagctgcttggatgatggacgtaacatcaacatca
atggaggtgcaacacaacatggactttgcgattttgtatgacgaatcatcacagcataga
gacatcgtagagctagtggagaagctaagcatcccaataccaaattcagaaattctatct
ttctcccatcgtttcccacggaatggctggattcaactaaaagcttgcttgtggaaacaa
aacttaacttactggagaagtcctgagtataacttgaggcgtataatgctgacagtaata
tctgccctggtctacggagtattgttctggaagcgtgcaaaaatattaaacgacgagcaa
gacctgttcaatgtttttggtgcaatgtatctgggttccacaactatagggtcttataat
catcagtcaatcataccattcagtacaaccgagcgcattgtaatgtatcgtgagaagttt
gcaggaatgtactcatcttggtcatattcattcgcacaggctgccattgagatcccctat
gtatttatccaagtggtactatacacgttaattatctatccatcaattggttattattgg
acaacacacaaattcatatggttcttctacactacattttgttcaagtctctcctatatt
tatgttgggttgcttcttgtttcattaacccccaatgttcaagttgctaccatattggca
tcttttttcaacaccatgcaaacactattctcaggatttattttacctgcgcctcaaatc
ccaaagtggtgggtttggctctactatctcactcctacatcttggacactcgatgccctc
ttgacatcacagtatgggaacatagagaaagaggtcagagcatttggagaaactaaatca
gtttcgatcttcttgaatgactatttcgggtttcataaagacaagttgagcctagtagca
gctgttctcattgcctttccttttgtgttgataatcctgttctctttttcaattgagaaa
tttaattttcagaagaggtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (54)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (33)   
   Pfam (33)   
All databases (109)   

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