KEGG   Psychrobacter alimentarius: A3K91_0977
Entry
A3K91_0977        CDS       T04320                                 
Name
(GenBank) DNA helicase UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pali  Psychrobacter alimentarius
Pathway
pali03420  Nucleotide excision repair
pali03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pali00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A3K91_0977
   03430 Mismatch repair
    A3K91_0977
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pali03400]
    A3K91_0977
Enzymes [BR:pali01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A3K91_0977
DNA repair and recombination proteins [BR:pali03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A3K91_0977
   MMR (mismatch excision repair)
    Other MMR factors
     A3K91_0977
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 DEAD AAA_12
Other DBs
NCBI-ProteinID: AMT96591
UniProt: A0A144NVS3
Position
1178561..1180726
AA seq 721 aa
MKPTIFDTHHYNYPQNFIEMKPKLARLKKAIEKLEANLMTADTDLLQQRLADDLGLEIDY
ASELNANQLLAATTIEGKVLVIAGAGSGKTKTLTYRTSYLIENGVSPKEILLLTFTRKAA
NEIKGRAKTLLASSLTGDGENQKDSQALNAITSGTFHSFCILLLRQYSGLLGINPRFTIL
DTGDSEDAIDLINKEKKYATNITSQAFPRKKTLQKIFSTSRNRRIHIRELIESGYPDIAT
HISAIEQLAIDFHEYKRANHLYDFDDIIGQVVRHLKTNDKFRQLLQTHYRYVMVDEYQDT
NIPQKELIDLICTPESVSLMVVGDDNQSIYAFRGANYENILLFGETYPDAKLIKLEQNYR
STPAVLNYINALSDEITLGYQKQLYSGSQVEGVKPVFCRLSNETKEAKYIADKIIALKSE
YDYQDFAVLCRTSFQSNYIQLEFMDRHIPFIVIGGIKFIERRHIKDVLAFVKILYNPNDT
ISWHRILTLFKGVGSVTATRLTQAITADNNSFEPLLTARFAKKSDQLMPLYKMLSQANQA
DSVEKIITLILEFYIPVLKINEDNWRERSEDFRVLTNLANEHDSLDSFLENLALDPPNDS
VATAGKFEQGEEETDKLTISTIHSAKGLEWPVVFVNALVDGITPHYRSLNDFAELEEERK
LFYVACSRAKHRLFLTAPDYFSSYSGYFDKASRFIAELSIDKVKVETMKQPVIESDEPVW
W
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgaaacccacgatttttgacacacatcattataactatccacaaaacttcattgagatg
aaacccaagcttgcgcgtcttaaaaaagcgattgagaagcttgaagccaacttgatgacc
gcagatactgacttgttgcagcaacggcttgccgatgatttaggactagagattgactat
gccagtgagctaaacgctaatcagctcttggctgccacgaccattgaagggaaggttttg
gttatcgcgggtgcaggctctggcaaaaccaaaacactcacttatagaaccagttatttg
atagaaaatggcgtgtcgcccaaagagattttgctactaacctttacccgtaaagccgcc
aatgaaatcaaaggtcgcgccaagaccttgctggcaagtagcctcacgggtgatggtgag
aatcaaaaagacagtcaagcgctcaatgcgattaccagcggtacttttcactcattttgt
atccttctgctgcgccaatattcaggactgcttggtatcaatccaaggtttaccattttg
gatacaggcgatagcgaagatgcaatcgacttgattaataaagagaaaaaatacgcaacc
aatatcactagccaagcttttccgcgcaaaaagacgttgcaaaaaatattttccacgtct
agaaatcggcgtatccatatccgtgaattaattgaaagtggctatcccgatattgctacc
catatttctgctatagaacaattggcgattgactttcacgaatacaaacgcgccaatcat
ttatacgacttcgatgacattatcggccaagtggtacgtcatctaaaaaccaatgacaaa
ttccgtcagctgctccaaacgcattatcgttatgttatggttgatgaatatcaagacacc
aatattccgcaaaaagagctgattgatcttatttgtactcctgaatcggtttcactgatg
gtggtcggtgatgataaccaaagcatctacgcctttcgcggtgccaattatgagaatatt
cttttatttggtgagacgtatcctgatgccaagcttattaagcttgagcagaattatcgt
agtacgcctgctgtcttaaattatattaatgccttatcagatgaaattacattaggctat
caaaaacagctgtattcaggctctcaagtagagggagtgaagcctgttttttgccgcttg
agtaacgaaaccaaagaagccaaatatatcgctgataaaatcatcgcgctaaagtcagaa
tatgattatcaagattttgcggtattgtgccgaacgtcttttcagtctaattatatacag
ctggaatttatggatcgtcatattccattcattgttatcggcggtattaagttcattgag
aggcgtcatatcaaagatgtactggcatttgtcaaaatcctctataaccccaacgatacc
atatcctggcatcgtatcttgaccttgtttaaaggggttggatcagtcactgcaacgcgt
ctaacccaagcaatcacagcggataacaattcttttgagccattactgaccgcaagattt
gccaaaaagagcgatcaactgatgccattatacaagatgctaagccaagccaatcaagcg
gactcagttgaaaaaattattacgctgattcttgaattttatatacctgtcttaaaaatc
aatgaagacaattggcgggagcgtagtgaggattttcgtgtcctcacaaacttagcgaat
gagcatgacagtcttgatagttttttagaaaatcttgcactcgatccgcctaatgactca
gttgccaccgcaggtaagtttgaacaaggcgaagaggaaaccgataaactaaccatctct
actattcatagcgctaaaggactcgaatggcctgtggtattcgtgaatgcattggttgat
ggtatcacgccacactatcgatcattgaatgattttgcagagttggaggaggagcgtaaa
ctgttttatgttgcttgtagtcgtgccaagcatcgattgtttttaaccgcaccagattat
ttttcgagttactcaggatactttgacaaagcctcacggtttatcgctgagctgtccata
gataaggtcaaggtagaaacgatgaaacagccagtgatagaaagtgatgagccagtgtgg
tggtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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