KEGG   Podospora anserina: PODANSg5742
Entry
PODANSg5742       CDS       T01048                                 
Name
(RefSeq) hypothetical protein
  KO
K03257  translation initiation factor 4A
Organism
pan  Podospora anserina
Brite
KEGG Orthology (KO) [BR:pan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pan03019]
    PODANSg5742
   03012 Translation factors [BR:pan03012]
    PODANSg5742
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pan04147]
    PODANSg5742
Messenger RNA biogenesis [BR:pan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     PODANSg5742
   mRNA cycle factors
    Stress granule specific factors
     PODANSg5742
Translation factors [BR:pan03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    PODANSg5742
Exosome [BR:pan04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PODANSg5742
  Exosomal proteins of bladder cancer cells
   PODANSg5742
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 AAA_30 CMS1 IL17R_D_N Flavi_DEAD UvrD-helicase fragilysinNterm
Other DBs
NCBI-GeneID: 6192938
NCBI-ProteinID: XP_001908707
UniProt: B2AYA6
Position
1
AA seq 396 aa
MADKGLEDVPEGQIESNYDETVDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKG
HDVIAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVAIGDFMNI
ECHACIGGTSVRDDMKALGEGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSR
GFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFY
IAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQ
RDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKG
VAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI
NT seq 1191 nt   +upstreamnt  +downstreamnt
atggctgacaagggtctcgaggacgtccccgagggacagatcgagtctaactacgatgag
accgtcgactctttcgatgagatgaacctcaagtcggagctcctccgcggtatctatgcc
tacggtttcgagcgcccctctgctattcagcagcgtgctatcatgcccgtcatcaagggc
catgatgttatcgcccaggctcagtccggtactggcaagactgccaccttctctatctcg
gtcctccagaagatcgacacctccctcaagcagtgccaggccctcattctcgcccccacc
cgtgagttggcccagcagattcagaaggtcgttgtcgccattggcgacttcatgaacatt
gagtgccacgcctgcattggtggtaccagcgtccgagacgatatgaaggctctcggcgag
ggcccccaggtggttgtcggtacccccggtcgtgtccacgacatgattcagcgtcgtttc
cttaagacggactccatgaagatgtttgtcctcgacgaggccgatgagatgttgtctcgt
ggtttcaccgagcagatctacgacatcttccagctccttccccagagcacccaggtcgtc
cttctctcggccaccatgccccaggacgtccttgaggtcaccaccaagttcatgcgcgac
cccgtccgcatcttggtcaagaaggacgagcttacccttgaaggtatcaagcagttctac
atcgccgtcgagaaggaggagtggaagctcgataccctctccgatttgtatgagactgtc
accatcacccaggccgtcatcttctgcaacacccgccgcaaggtcgactggcttaccgac
aagctcactgcccgtgatttcaccgtctcggccatgcacggtgacatggaccaggcccag
cgtgacctcatcatgaaggagttccgctccggctcctctcgtgtcctcatcgccactgac
cttttggcccgtggtattgatgtccagcaggtttccctggtcatcaactacgatctcccc
gccaaccgtgagaactacattcatcgcattggtcgtggtggtcgtttcggtcgcaagggt
gttgcgatcaactttgtcactgctgatgatgtccgcatgatgcgcgagattgagcagttc
tacagcacccagattgaggagatgccgatgaacgtggccgacctcatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (98)   
   KEGG ORTHOLOGY (1)   
   RefGene (94)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (117)   

Download RDF
DBGET integrated database retrieval system