KEGG   Persicimonas caeni: FRD00_02870
Entry
FRD00_02870       CDS       T06769                                 
Name
(GenBank) AAA family ATPase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pcay  Persicimonas caeni
Pathway
pcay03420  Nucleotide excision repair
pcay03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcay00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FRD00_02870
   03430 Mismatch repair
    FRD00_02870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcay03400]
    FRD00_02870
Enzymes [BR:pcay01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FRD00_02870
DNA repair and recombination proteins [BR:pcay03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FRD00_02870
   MMR (mismatch excision repair)
    Other MMR factors
     FRD00_02870
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 AAA_11 ResIII DEAD
Other DBs
NCBI-ProteinID: QED30940
Position
766086..768140
AA seq 684 aa
MMNLNLGMLNPQQREATTHIDGPLLILAGAGSGKTRVITTRIAYLITRGIEPKSILAVSF
TNKAATEMQERVAQLTGDKLAQQTYLSTFHSLGADILRQDIDALGFKKPFTILDQGDQQS
VIKDAFKELKLDPKVVDPRRILSLISKAKMGFCEPKELPELKHDPLMPYAQKIYGFYTGA
LKGLNAVDFDDLICLPVVLFKEHEKVRQKYARRFQYVMVDEYQDTNMTQLLFLRELVKDH
MNLCVVGDDDQSIYGFRGAVAENILEFEKQFEGVKVVKLEQNYRSTNNILRAANEVIANN
SVRKEKALWSSKGDGTKLRYVECEDEREEAEFVAAEIERYKLKYDLRYRDCAILYRVNPQ
SRLFEEALRTYRIPYTVVGSTEFFDRKEVKDFVAYLKACVNHNDEVSIRRVVNVPPRGIG
PTLLERISDFAHEEDISFHLALCKIADDPSHVHGIGYAVSENIADFIDILDTFNEKFEEA
EDDPSIRMAEISREVLKRTNLIDHIRSVEKNPKIARRRIDNVDEILSSLSQYQDAGGDSL
KSYLTRITLDRSDPGEDEAEKEGVRMMTLHSSKGLEFPVCFLVGMEEGYLPHGRSLDDRQ
GLAEERRLCYVGITRAKEHLTLTSAAMRKRYGQEEDREPSRFLEEIPEETIEWQRAESSV
SLAEKREEQNQKYLSALKSAIFDD
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgatgaacctgaacctcggcatgctcaacccgcagcagcgggaggcgaccacccatatc
gacggcccgctgctgattctggccggcgcaggtagtggcaagacgcgcgtgatcaccacg
cgcatcgcctacctgatcacccggggcatcgagcccaagtcgatcttggcggtgagcttc
accaacaaggcggccaccgagatgcaggagcgcgtcgcccaactgacgggcgacaagctc
gcccagcagacgtacctgtcgaccttccacagcctcggcgccgatattttgcgccaggat
atcgacgcgttgggcttcaagaagccgtttacgatcctcgaccagggcgaccagcaatcg
gtgatcaaagacgcgttcaaggaactcaagctcgacccgaaggtcgtcgacccgcgccgg
atcctgagcctgatcagcaaggcaaagatgggcttttgcgagcccaaggagctccccgag
ctcaagcacgacccgctgatgccctacgcccagaagatctacgggttctataccggcgcc
ctcaaagggttgaacgccgtcgacttcgacgacctgatctgcttgccggtcgtcctcttc
aaggagcacgaaaaggtacgccagaaatacgcgcgccgcttccagtacgtcatggtcgac
gagtaccaggacaccaacatgacccagctgctcttcttgcgcgagctggtcaaagaccac
atgaacctgtgcgtggtgggtgacgacgaccagagcatctatggcttccgaggcgcggtc
gccgagaatatcctggagttcgagaagcaattcgaaggggtcaaggtcgtcaagctcgag
cagaactatcgctcgacgaacaatattttgcgcgcggccaacgaggtcatcgcgaacaat
tcggtgcgcaaggagaaggcgctgtggagctcgaagggcgacggcacgaagctgcgctat
gtcgagtgtgaggacgagcgtgaggaggccgagttcgtcgccgccgagatcgagcgctac
aagctcaaatacgacctgcgctaccgcgactgcgcgattctgtaccgcgtcaacccgcag
agccggctcttcgaagaggcgcttcgcacctaccgcatcccgtacacggtggtcggctcg
accgaattcttcgaccgaaaagaggtcaaagacttcgtcgcctacctgaaggcgtgcgtg
aaccacaacgacgaggtgagcatccgccgagtcgtcaacgtgccgccgcgcggcattggc
ccaaccctgctcgagcgcatcagcgacttcgcccacgaagaagacatcagcttccacctg
gccctgtgcaagatcgccgacgatccgtcgcacgtgcacggcatcggatatgcggtctcg
gagaacatcgccgatttcatcgacatcctcgacacgttcaacgagaagttcgaagaggcc
gaggacgacccatcgattcgcatggccgagatcagccgcgaggtcctgaagcgcaccaac
ctcatcgaccacatccgaagcgtcgagaagaaccccaagatcgcccgccggcgcatcgac
aacgtcgacgagatcttgtcgtcgctctcccagtaccaagacgccggaggcgactcgctc
aagagctacctcacccgcatcaccctcgaccgcagcgaccctggcgaggacgaagccgaa
aaagagggcgtgcgcatgatgacgctgcactcgtcaaagggtctcgagttcccggtttgc
tttttggtgggcatggaggagggttacctgccccacggccgcagcctcgacgaccgtcag
ggcttggccgaggagcgccggctctgctacgtcggcatcacccgcgccaaggagcacctg
acgctcacgtcggcggccatgcgcaagcgatacggccaagaggaagaccgcgagccgagt
cgtttcttggaggaaatccccgaggagaccatcgagtggcagcgcgccgagtcgtcggtg
agcctggccgagaagcgtgaggagcagaaccagaagtatctgtcggcgctgaagtcggcg
atcttcgacgactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system