KEGG   Pediococcus claussenii: PECL_79
Entry
PECL_79           CDS       T01713                                 
Name
(GenBank) uvrD/REP helicase family protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pce  Pediococcus claussenii
Pathway
pce03420  Nucleotide excision repair
pce03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pce00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PECL_79
   03430 Mismatch repair
    PECL_79
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pce03400]
    PECL_79
Enzymes [BR:pce01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PECL_79
DNA repair and recombination proteins [BR:pce03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PECL_79
   MMR (mismatch excision repair)
    Other MMR factors
     PECL_79
SSDB
Motif
Pfam: UvrD-helicase UvrD_C_2 AAA_19 Viral_helicase1 UvrD_C AAA_30 SLFN-g3_helicase AAA_16 NACHT DEAD NRDD Pallilysin
Other DBs
NCBI-ProteinID: AEV94407
UniProt: G8PEE6
Position
complement(81494..83785)
AA seq 763 aa
MEEEQAKEQKRVDEVIDKIEKQKQHTQDLYDKAHTETSSVEKNYVQNAKVNLIEADDRIE
TNAEIQQQKGLVARAVENETILQRQINDLENLKKSPYFGRIDIQDPDEPVSESLYIGISS
FADQSGDFLVYDWRAPISSIYYNGTLGPVQYSTPAGTMQTDLKKKRQFNIQNGEIVHMFD
TNETVGDEMLQEALGEQNDEYMRNIVATIQKDQNDIIRDTRSDLLVVQGVAGSGKTSAIL
QRIAFLLYHSRTSLNADEIVLFSPNKLYSRYISDVLPSLGERNMRQLTLAEFFSRRFEGM
HVESLFDRYEKQVSLTSEQQALQDWLEGEDFMHLLEQYTLNLNANNIKFTDINLDGTVFF
KKEDIQNIFESFPTSMRVSERVLRTKNQLIKKLKQRIKLEIQKDWVQERLEDVNEENYHD
IVGKRHFKSFEEEKNFIGASIVQKKFQVIDDAIFNNYFIDIYSQYISFMNSLDVSVNISN
AWRHHIDEFSKQLELHQISLLNATPLLFLRDLITGGGGNRKFQHVFIDEMQDYSVAQLMY
LKHAFSKAKFTLLGDSEQSLFKDITDPNELLKKLKSAFDVRRARLITLNRSYRSTAPITN
FAAALIPDGQKIEAFNRQGDLPKIILTNSPRVMSADLQQLCHEELKAFGTVAVLTKDMAE
SEQVFNILQSSLHPTLMTDGDRSLPKGVVIMPIYLAKGLEFDSVIGFNVSQENYPTELWR
GTLYTIASRAMHHLTLISQGNVSPLITHLDTNLFGMQTSILPK
NT seq 2292 nt   +upstreamnt  +downstreamnt
ttggaagaagaacaagccaaagaacaaaaacgtgttgatgaagttatcgacaaaattgaa
aagcaaaaacaacatacacaagatctatacgataaagctcataccgaaacaagcagtgtt
gaaaagaactacgttcaaaacgcaaaagttaacctgattgaggccgatgaccgaatcgaa
accaatgcagaaatccaacagcaaaagggattagtcgctcgagctgtcgaaaatgaaact
attttgcaacgtcagattaatgaccttgagaatctaaaaaaatcaccctattttggaaga
attgatattcaggatcctgacgaacccgttagcgaatcactatatattggtatctcctca
tttgccgatcaaagtggtgattttttagtctatgattggagagcaccaatttctagtatc
tactacaacggaacacttggtcctgttcaatattcaacaccagcaggaactatgcaaact
gatctaaaaaagaaacgtcaatttaatatccaaaacggtgagatcgtccatatgtttgac
actaatgaaactgtgggtgatgagatgctacaggaagcacttggtgaacaaaatgatgaa
tatatgcgcaatattgtagctactattcaaaaggatcaaaatgatatcattcgcgacact
agaagtgatcttcttgtagttcaaggtgtcgctggtagcggtaaaacttccgctatctta
caacgaatagctttcctactgtaccatagtcgaacttctttaaacgccgatgaaatcgtc
ctattttcacctaacaaattatacagtcgttatatttcagatgttcttcctagtctaggt
gaacgtaacatgcgtcaactaaccctcgcagagttcttttctcgtcgttttgagggtatg
catgttgaatctctgtttgatcgttatgaaaaacaagttagcttaacctcagagcagcaa
gcattacaagattggctcgaaggcgaagattttatgcacttattagaacaatataccctt
aatcttaacgccaataatattaagtttactgatattaacttagatggtactgtcttcttc
aaaaaggaggatattcaaaatatttttgaatcatttccaactagtatgcgtgtgtctgaa
cgagttttgcgtactaaaaatcaactcattaaaaagcttaagcaaagaattaaactcgag
attcaaaaagactgggttcaggaacgcctagaagacgttaacgaagaaaactatcatgat
atcgttggtaaacgacatttcaagagttttgaagaagaaaaaaacttcattggagcctcg
atcgttcaaaaaaaattccaagtaatagatgatgctatttttaacaactattttattgat
atttatagccaatatattagttttatgaacagcttggatgtttccgtcaatatttctaac
gcgtggcgacaccacattgacgagttttctaaacaacttgagttacatcaaattagtctc
ttaaatgccacgccattactatttctccgtgatttgataactggtggtggcggaaaccgc
aagttccaacacgttttcattgatgaaatgcaagattactccgttgctcaactaatgtat
ctaaaacacgccttttctaaggcaaagtttacattattaggcgatagcgaacagtccctc
ttcaaggacatcactgatcctaacgaactattaaaaaaactaaaatcagcatttgatgtt
cgccgagcgcgtttgatcactttaaacagaagttaccgttccacggcacctattactaat
tttgcagcagcgctgattccagatggacaaaagattgaggcattcaatcgccaaggggac
cttcctaaaatcattctaacaaattcaccccgtgtaatgtcggcagacttgcagcaactc
tgtcacgaagaactaaaggcatttggcaccgttgcagttttaacaaaagacatggcggaa
agcgaacaagttttcaatattctccaatcaagcctccatccaactttaatgacggatgga
gaccgctctttgccaaagggtgtagtaattatgcccatctacttagcgaaaggtctggaa
tttgattctgtaattggcttcaatgtctctcaggaaaattatccaacggaactttggaga
gggactttatacacaatcgcatcaagagcaatgcatcaccttactttaataagtcagggt
aatgtttctccattaattacacatttagatactaatttgtttggtatgcaaacttctatt
ttaccgaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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