KEGG   Polistes canadensis: 106784045
Entry
106784045         CDS       T05611                                 
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
  KO
K20099  ATP-dependent RNA helicase YTHDC2 [EC:5.6.2.6]
Organism
pcf  Polistes canadensis
Brite
KEGG Orthology (KO) [BR:pcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcf03041]
    106784045
Enzymes [BR:pcf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     106784045
Spliceosome [BR:pcf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    106784045
SSDB
Motif
Pfam: HA2_C OB_NTP_bind Helicase_C R3H DEAD Ank_2 AAA_22 nSTAND3 HA2_N Ank AAA_19 Ank_5 T2SSE UvrA_inter ATPase PhoH Ank_4 SRP54
Other DBs
NCBI-GeneID: 106784045
NCBI-ProteinID: XP_014598628
Position
Unknown
AA seq 1154 aa
MPRRKQQRPPLIGEDTRIAVNLTLKKLLGTPDQKELEFPSSYTAEERAYVHELARELGLK
SKSRGKGINRFLTVYKREGSTIVQADAIIKLQKSSKQSIYALLHNFPLNHKECQDLLPPM
ERERPLNADVIASTKAMGRLNSSIPQVPQLKTNFDVLNFRKSLPVYNAREDILNALAINQ
IIIIAGETGSGKTTQVPQYILEHCQQRHQTCRIICTQPRRLSAVSVAERVAFERDEKIGQ
TFGYQIRLESRVAPKTLLTYCTNGVLLRTLMGGDSALTTVTHIIVDEVHERDRFCDFLLI
ALKDAVNKYRSLKIILMSATLDTNIFAKYFDKCTVINIPGRLYEVETYFLEDILKMTGYM
TKEMIMRKKEFLNKKEQCKVLESWTQYKPQISGKGSSNERCLLPAPILAQQNEPIPEKVK
LEPWLIEEVDKSISDAWLCGEEDNFAQLLHFILSENVSVDYQHSKTLVTPLMVAAGRGCI
NTTEQLLNLGANLNLRAGNEWTALDWAKNMKQIECAELIEAYMKTYDCAVQDCEIEHGEN
VPLSEEAKMLLNVYHHTFNDENIDYDLLVHLVIYIHLKLPPGSILIFLPGYDDIVNVREK
INSEEKKLNQGLRYTLYILHSNMQTCDQKKVFKPSPQGSRKIILSTNIAETSVTIDDIVY
VIDSGKVKEKSFDAILGVCTFRSNWISQACAKQRKGRAGRCKKGFCYRLFSSIRFSNMAS
HQTPEILRLPLQELCLFTKHLAPGNTPIAEYLDRAIEPPSNVVTRNAVQLLKTIDALDPW
EDLTELGSHLLDIPIEPRLGKMLLYAVVLKCLDPVLTIVCSLAYKNPFILPAQPSQKRAV
AAARKKFANGTYSDHMAVLRAFQSWQNARASGKERSFCEKNFISAPVMEMVVGMRTQLLG
QLRASGFVRARGAGDIRDLNTNSENWAVVKAAITAGLYPNLIRVDRDHMQLRTQKEVKVF
FHPSSTLRDFPKSPRMTYTQTHASNVESLPSDWLLYEEISRTGRFCHVKIVTLVNPLTVA
LFSGPARLPMDVIYEAGAIPESESDSEVDENHEGTIFKLDDWVVFKLDIETVQLFLNLRQ
KWNALFLRRMKAPGKPMSQLDEKVVSTIVTVLTNEELACGLQQPSGIGQRPRPLIVDYYP
ANARRADDFVERNF
NT seq 3465 nt   +upstreamnt  +downstreamnt
atgcctcgacgcaagcaacaaaggccacctctgataggagaagacactagaatagcagta
aatttaactttgaagaaattattaggaacaccagatcaaaaagaattagaatttccatct
tcatatacagcagaagagcgagcttacgtccatgaacttgctagggagcttggtttaaaa
tccaaaagcagaggtaaaggcataaatcgatttttaactgtatacaagagagaaggatct
actatagttcaagccgatgcaattatcaagctgcaaaagtcttcaaaacaaagtatttat
gctttattgcataatttcccattgaatcataaagaatgtcaagatttgttacctccaatg
gaaagagaacggcctcttaatgcagatgttattgcaagcacaaaagctatgggtcgcttg
aatagtagtatcccacaagtaccacagttgaagactaattttgacgtattgaattttcgt
aaatcacttccagtttataatgcacgagaagatattttaaatgctttagccattaatcaa
ataatcataatagctggggaaacaggaagtggtaaaactactcaagtacctcaatatata
ttagagcattgccaacaaagacaccaaacttgtagaattatatgcactcaacctaggagg
ctttccgcagtatctgttgctgaaagagttgcatttgaaagggacgaaaaaattggacaa
acatttggttatcaaataagacttgaaagtagagttgcgcctaaaactctattgacatat
tgtactaatggagttcttcttaggactcttatgggtggagactctgctttaactacggtt
acacatataatagtagatgaagttcacgaacgtgacagattttgtgatttccttttaata
gcattaaaagatgctgtgaataaatatagatcattgaaaatcattcttatgagtgcaact
ttagataccaatatttttgccaaatattttgataagtgcactgttattaatattcctggt
agattgtatgaagtagaaacatattttcttgaagatattttaaaaatgactggctacatg
actaaggaaatgattatgagaaaaaaagaatttttaaataaaaaagaacagtgcaaggtc
ttagaatcttggacgcaatacaagccacaaatttctggtaaaggctcatcgaatgaaaga
tgcttgttacctgcgccgatattagcacaacaaaatgaaccgataccagagaaggttaaa
ctcgaaccatggttaatagaagaagtagataaaagtatatcggatgcatggttgtgtggt
gaggaagataactttgcacaattattgcattttatactctctgaaaatgtttctgtagat
taccaacattctaaaacattagttacaccattaatggttgctgcaggtagaggatgtata
aatactaccgaacagcttttaaatcttggagcaaatctgaatcttcgagcaggtaatgaa
tggactgcgctagattgggcaaaaaatatgaaacaaattgaatgcgctgaattgattgaa
gcatatatgaaaacatatgattgtgctgtgcaagattgtgaaatagagcatggtgaaaat
gttcctctctctgaagaagctaaaatgttattaaatgtatatcatcatacatttaatgat
gaaaatatcgattatgatcttcttgtacatctcgttatatatattcatttaaaattgcca
ccaggttcaatattaatatttttgcctggatacgatgatatagtaaatgtgagagaaaaa
ataaatagcgaggaaaagaaattgaatcaaggtcttcgttacactttatatatacttcat
tcgaatatgcaaacgtgtgatcaaaaaaaagtgttcaaacctagtccgcagggaagtaga
aaaattattctttctacaaatatagcggaaacaagcgttacgattgatgatatcgtctat
gtgattgattcaggaaaagtcaaagaaaaatcatttgacgcaatattaggtgtatgtaca
tttcgttctaattggatatcgcaggcatgtgcgaaacaaagaaagggaagagctggcaga
tgtaagaaaggtttctgctatcgcttattttcttcaattcgatttagtaatatggcgtct
catcaaacacctgaaatcttacgattacctttgcaagaattatgtcttttcacaaaacat
ttggcaccaggaaatacaccaattgcagagtatttagacagagctatagagcctccttcc
aatgtagtaactagaaatgctgttcaattattgaagaccatagatgcattggatccgtgg
gaagaccttactgaattaggaagtcatttattagatataccaatagaaccaagactagga
aaaatgttgctatatgcagtagttttaaaatgtctcgatccagttcttacaattgtttgc
agtttggcatataaaaatccatttattttaccagctcaaccatcacaaaaaagggctgta
gctgcggctcgaaaaaaatttgcaaacggaacttattcagatcatatggctgttttgcga
gcatttcagagctggcaaaatgctagagcaagcggcaaagaacgtagtttttgtgaaaaa
aattttatttcagcacctgttatggaaatggttgttggaatgcgaactcaacttcttggt
caacttcgtgcatcaggatttgttagagcgaggggtgccggtgatattagagatttgaat
acaaattctgaaaattgggcagtcgtcaaagctgctataacagctggtttatatccaaat
ttaatcagagtcgatcgagatcatatgcaattaagaactcaaaaagaagtgaaggtcttc
tttcatccatcatcgacattaagagattttccaaaatctcctagaatgacttatacgcaa
actcatgcatccaatgtagagtcattaccatcagattggttactttatgaagaaataagt
cgtactggtcgtttctgtcacgttaaaatcgtaacgctcgtaaatcccttaaccgtggca
ctttttagtggtccagcaagattacctatggatgttatttatgaagctggtgcaataccc
gaaagtgaatctgattcagaagtggatgaaaatcatgagggtactatttttaaattggat
gattgggtagtattcaaacttgatattgagactgtacaattgtttttaaatttacgacaa
aaatggaatgctttattcttacgacgtatgaaagcaccaggaaaacctatgtcacaatta
gatgaaaaagttgttagtacaatagtaacagttcttactaatgaagagctagcatgtgga
ttgcaacaaccttcaggaattggacaaagacctcgtcccttaatagtcgattattatcct
gcaaatgctagaagagcagatgactttgtcgagagaaacttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (18)   
   Pfam (18)   
All databases (31)   

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