KEGG   Paenibacillus donghaensis: B9T62_07520
Entry
B9T62_07520       CDS       T04971                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
pdh  Paenibacillus donghaensis
Pathway
pdh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pdh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B9T62_07520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdh03019]
    B9T62_07520
   03009 Ribosome biogenesis [BR:pdh03009]
    B9T62_07520
Enzymes [BR:pdh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     B9T62_07520
Messenger RNA biogenesis [BR:pdh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     B9T62_07520
Ribosome biogenesis [BR:pdh03009]
 Prokaryotic type
  rRNA helicases
   B9T62_07520
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CMS1 AAA_19 Helicase_RecD
Other DBs
NCBI-ProteinID: ASA20654
UniProt: A0A2Z2K6U8
Position
1790095..1791762
AA seq 555 aa
MKTFAEFGLEPKVLQAILELGFEEATPIQEQSLPFALAGSDLIGQAQTGTGKTAAFGIPL
ISKIDREDEKILALIMTPTRELAIQVAEEIGKLARFKGLRSLAIYGGQDIGRQIRGLKKK
PQIIIGTPGRLLDHINRKTIRLDDVQTVVLDEADEMLDMGFMEDITSILKLVPEERQTML
FSATMPSNIQRLAQQFLKNPQHVSVIPKQISAPLIDQAYVEVPERQKFEALSRLIDMESP
DLAIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQRDAVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGTAWSFVTPREIDHMHLIERVTR
SKITRKPLPTMAEAIEGKQRITAERVLGMVESDELNEYKGMAIQLLEQYDSVQLLSAAMK
LLTGDKKDSQIELTPEDPIRAKRRGGKNDIRSGRKPSGSYGANRSGSGSSGGYKGNRDSS
TGGGYKGNRDSSTGGGSRGGYSSNYGGGSGSGGYGGGYKGNRDSASTGGSADRKPAARPS
SSTSTRPAKREDYDI
NT seq 1668 nt   +upstreamnt  +downstreamnt
ttgaaaacattcgcagaatttggtttggagcctaaggtgttgcaggcgattttagaactg
ggatttgaggaagcaacacccatccaggagcaatccttgcctttcgcactggccggatcg
gaccttattggccaggcacagacaggtacaggcaaaactgccgcttttggtattcccctc
atctccaagattgaccgtgaggacgagaagatccttgcactaatcatgaccccaacccgt
gagcttgctattcaggtagctgaagaaatcggcaagctggcccgcttcaaaggccttcgt
tcactcgctatctacggtggacaggatattggccgccagatccgcggtttgaagaagaaa
ccgcagattatcattggtacccctggacgtctgcttgaccacatcaaccgcaagaccatc
cgtctggatgatgtacagaccgttgttctggatgaagcggatgaaatgctggacatgggc
ttcatggaagatatcacttccatcctgaagctggttccggaagaacgtcaaaccatgctg
ttctcggcaaccatgccttcgaacattcagcgtctggcacagcaattcctgaagaaccct
cagcatgtatcggttattcctaagcaaatcagtgcaccgttgatcgatcaggcttatgtg
gaagttcctgaacgtcagaagtttgaagcgctcagccgtctgattgatatggagtcccct
gatctggcgatcgtctttggccgcaccaagcgccgggtagatgaattggctgaagctctg
cagaagcgcggctattcagctgatggcctgcatggtgacctgtcccagaatcagcgtgat
gcggttatgcgcaagttccgcgatggcagcattgatgtgctggttgccactgacgttgca
gcacgtggtttggacgtttcgggtgtcacccatgtaatcaactttgaccttccgcaggat
ccagagagttatgttcaccgtatcggccgtaccggccgcgctggcaaggaaggtacagcc
tggtctttcgtgactccgcgcgaaatcgatcatatgcacctgattgaacgggttacccgt
tccaagattacccgcaaaccgctgccaaccatggcggaagctattgaaggcaagcaacgc
atcactgcagaacgtgtgcttggcatggttgaaagtgatgaattgaacgaatacaaaggt
atggctattcaattgctggagcaatacgactccgtgcagctgctctccgcagcgatgaag
ttgcttaccggcgacaagaaagattcccagatcgaattgactccggaagatccaatccgt
gcaaagcgccgcggcggcaagaacgatattcgcagcggacgcaagcctagcggcagctat
ggcgccaatcgcagtggttccggcagctccggcggctacaagggcaaccgcgatagcagc
actggcggcggctacaaaggcaatcgtgacagcagcaccggcggcggaagccgtggcggc
tacagctcgaattacggcggtgggagcggaagtggcggctatggcggtggctacaaaggc
aaccgtgatagcgcatctaccggtggcagtgctgaccgcaagcccgctgcacgtccaagc
agcagcaccagcacacgtccagctaaacgtgaagactacgatatctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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