#=GF ID BAT
#=GF AC PF15915.9
#=GF DE GAF and HTH_10 associated domain
#=GF AU Coggill P;0000-0001-5731-1588
#=GF SE Friedhelmfpf
#=GF GA 25.80 25.80;
#=GF TC 25.80 25.80;
#=GF NC 25.70 25.70;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP Domain
#=GF RN [1]
#=GF RM 8202511
#=GF RT The bat gene of Halobacterium halobium encodes a trans-acting
#=GF RT oxygen inducibility factor.
#=GF RA Gropp F, Betlach MC;
#=GF RL Proc Natl Acad Sci U S A. 1994;91:5475-5479.
#=GF DR INTERPRO; IPR031803;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC GAF-HTH_assoc domain is always found between GAF-2 and HTH_10
#=GF CC domains on bacterio-opsin activator proteins. The exact function
#=GF CC is not known.
#=GF SQ 1725
#=GS A0A1M5UDV9_9EURY/371-524 AC A0A1M5UDV9.1
#=GS L0JZ50_9EURY/509-662 AC L0JZ50.1
#=GS L9WDD9_9EURY/153-300 AC L9WDD9.1
#=GS A0A6G3ZGX5_9EURY/7-156 AC A0A6G3ZGX5.1
#=GS A0A1I0Q097_9EURY/325-477 AC A0A1I0Q097.1
#=GS A0A8J7ZSJ8_9EURY/592-744 AC A0A8J7ZSJ8.1
#=GS A0A0W1R5N1_9EURY/451-606 AC A0A0W1R5N1.1
#=GS M0AU18_NATA1/12-183 AC M0AU18.1
#=GS A0A830FFG7_9EURY/15-164 AC A0A830FFG7.1
#=GS A0A7D5QDV4_9EURY/6-158 AC A0A7D5QDV4.1
#=GS R4VXT8_9EURY/990-1145 AC R4VXT8.1
#=GS A0A3N6LZU4_NATCH/2-157 AC A0A3N6LZU4.1
#=GS M0L1N0_9EURY/3-156 AC M0L1N0.1
#=GS A0A1H6SC72_9EURY/6-154 AC A0A1H6SC72.1
#=GS M0MRD6_9EURY/328-482 AC M0MRD6.1
#=GS U1PM24_9EURY/8-151 AC U1PM24.1
#=GS A0A1G9Z4A0_9EURY/726-877 AC A0A1G9Z4A0.1
#=GS A0A202E9J0_9EURY/362-516 AC A0A202E9J0.1
#=GS L0IC85_HALRX/457-611 AC L0IC85.1
#=GS A0A1N7FAE3_9EURY/4-150 AC A0A1N7FAE3.1
#=GS D8J4D6_HALJB/3-154 AC D8J4D6.1
#=GS M0MIU9_9EURY/3-139 AC M0MIU9.1
#=GS A0A166S3F7_9EURY/102-249 AC A0A166S3F7.1
#=GS A0A1U7ETZ5_NATPD/453-603 AC A0A1U7ETZ5.1
#=GS A0A3N6P0I9_9EURY/522-666 AC A0A3N6P0I9.1
#=GS M0MJ78_9EURY/5-150 AC M0MJ78.1
#=GS A0A6G3ZPR7_9EURY/363-518 AC A0A6G3ZPR7.1
#=GS L0JJY5_NATP1/476-630 AC L0JJY5.1
#=GS M0LC08_HALLS/4-153 AC M0LC08.1
#=GS L9XCE8_9EURY/3-156 AC L9XCE8.1
#=GS M0MQD7_9EURY/3-142 AC M0MQD7.1
#=GS M0CFB9_9EURY/482-629 AC M0CFB9.1
#=GS A0A1I6KK32_9EURY/1113-1267 AC A0A1I6KK32.1
#=GS A0A6B0T675_9EURY/1-150 AC A0A6B0T675.1
#=GS D2RQB1_HALTV/1-155 AC D2RQB1.1
#=GS A0A0W1R4T7_9EURY/18-173 AC A0A0W1R4T7.1
#=GS A0A1J1A9F2_9EURY/8-142 AC A0A1J1A9F2.1
#=GS R4W8R5_9EURY/301-454 AC R4W8R5.1
#=GS L9ZPP8_9EURY/452-606 AC L9ZPP8.1
#=GS A0A6G2FYV3_9EURY/6-155 AC A0A6G2FYV3.1
#=GS L9X6F4_9EURY/12-165 AC L9X6F4.1
#=GS A0A256KLM0_9EURY/494-645 AC A0A256KLM0.1
#=GS D2S108_HALTV/3-154 AC D2S108.1
#=GS D8JB66_HALJB/2-154 AC D8JB66.1
#=GS L0AEH9_NATGS/16-149 AC L0AEH9.1
#=GS A0A498GFD8_9EURY/389-544 AC A0A498GFD8.1
#=GS A0A8J7ZF92_9EURY/362-515 AC A0A8J7ZF92.1
#=GS L9XE91_9EURY/423-577 AC L9XE91.1
#=GS A0A063ZHQ9_9EURY/3-154 AC A0A063ZHQ9.1
#=GS A0A7D5KEA6_9EURY/1025-1180 AC A0A7D5KEA6.1
#=GS A0A1G9UG63_9EURY/2-154 AC A0A1G9UG63.1
#=GS A0A498G5S8_9EURY/2-147 AC A0A498G5S8.1
#=GS A0A7D5KGE3_9EURY/886-1041 AC A0A7D5KGE3.1
#=GS A0A0U5D0X1_9EURY/6-137 AC A0A0U5D0X1.1
#=GS D2RTR0_HALTV/837-989 AC D2RTR0.1
#=GS A0A1D8S5R8_9EURY/402-556 AC A0A1D8S5R8.1
#=GS L0JLN0_NATP1/732-881 AC L0JLN0.1
#=GS F8DAW7_HALXS/369-523 AC F8DAW7.1
#=GS D3SRA7_NATMM/3-143 AC D3SRA7.1
#=GS A0A3N6M7K7_NATCH/6-161 AC A0A3N6M7K7.1
#=GS A0A8J8CTK2_9EURY/5-141 AC A0A8J8CTK2.1
#=GS A0A8J8CZC6_9EURY/1-154 AC A0A8J8CZC6.1
#=GS A0A8J8C9U2_9EURY/951-1102 AC A0A8J8C9U2.1
#=GS A0A8J7ZIW8_9EURY/5-155 AC A0A8J7ZIW8.1
#=GS Q9HSM5_HALSA/645-797 AC Q9HSM5.1
#=GS A0A166RZ35_9EURY/4-157 AC A0A166RZ35.1
#=GS A0A346PP53_9EURY/434-588 AC A0A346PP53.1
#=GS V4IV13_9EURY/330-482 AC V4IV13.1
#=GS A0A8J8TNE5_9EURY/5-155 AC A0A8J8TNE5.1
#=GS A0A1I6L6X5_9EURY/10-154 AC A0A1I6L6X5.1
#=GS G2MNM7_9EURY/5-155 AC G2MNM7.1
#=GS M0A1L3_9EURY/345-499 AC M0A1L3.1
#=GS A0A1M5JIG5_9EURY/59-208 AC A0A1M5JIG5.1
#=GS D2RY12_HALTV/3-139 AC D2RY12.1
#=GS A0A6B0GKV5_9EURY/732-887 AC A0A6B0GKV5.1
#=GS A0A0U5H0J6_9EURY/3-147 AC A0A0U5H0J6.1
#=GS A0A7D5GJ13_9EURY/1-165 AC A0A7D5GJ13.1
#=GS A0A6B0VM38_9EURY/23-174 AC A0A6B0VM38.1
#=GS A0A6A9ST93_9EURY/308-461 AC A0A6A9ST93.1
#=GS A0A7D5QJM6_9EURY/2-154 AC A0A7D5QJM6.1
#=GS L9ZTK9_9EURY/13-137 AC L9ZTK9.1
#=GS M0AY07_NATA1/3-155 AC M0AY07.1
#=GS W0JY39_9EURY/15-155 AC W0JY39.1
#=GS A0A8J7ZQ69_9EURY/820-974 AC A0A8J7ZQ69.1
#=GS A0A1M5KWF2_9EURY/515-667 AC A0A1M5KWF2.1
#=GS A0A1H6WFK0_9EURY/321-475 AC A0A1H6WFK0.1
#=GS U1NLI2_9EURY/54-207 AC U1NLI2.1
#=GS L0AMN6_NATGS/33-183 AC L0AMN6.1
#=GS A0A1G9YG57_9EURY/2-146 AC A0A1G9YG57.1
#=GS D2RWP5_HALTV/24-173 AC D2RWP5.1
#=GS A0A343TLP4_9EURY/676-824 AC A0A343TLP4.1
#=GS D3T060_NATMM/2-155 AC D3T060.1
#=GS A0A7D5C665_9EURY/4-155 AC A0A7D5C665.1
#=GS A0A1I0MXZ2_9EURY/371-525 AC A0A1I0MXZ2.1
#=GS A0A063ZP78_9EURY/342-496 AC A0A063ZP78.1
#=GS G2MNU3_9EURY/1-155 AC G2MNU3.1
#=GS A0A1G9YP84_9EURY/2-147 AC A0A1G9YP84.1
#=GS A0A6B0SHX4_9EURY/7-178 AC A0A6B0SHX4.1
#=GS A0A1I6M2J3_9EURY/3-151 AC A0A1I6M2J3.1
#=GS U1NSI0_9EURY/438-591 AC U1NSI0.1
#=GS A0A063ZLZ0_9EURY/775-939 AC A0A063ZLZ0.1
#=GS A0A1J1ADG4_9EURY/1075-1223 AC A0A1J1ADG4.1
#=GS L9W476_9EURY/342-496 AC L9W476.1
#=GS M0AKR1_NATA1/6-155 AC M0AKR1.1
#=GS D2RXG1_HALTV/755-916 AC D2RXG1.1
#=GS A0A1Q1FM17_9EURY/9-144 AC A0A1Q1FM17.1
#=GS A0A8J7YR15_9EURY/567-713 AC A0A8J7YR15.1
#=GS A0A554NB60_9EURY/54-207 AC A0A554NB60.1
#=GS A0A4U5JK97_9EURY/308-461 AC A0A4U5JK97.1
#=GS F8DBJ2_HALXS/2-152 AC F8DBJ2.1
#=GS D8J6F8_HALJB/3-160 AC D8J6F8.1
#=GS A0A1I0PHA3_9EURY/732-882 AC A0A1I0PHA3.1
#=GS A0A4D6HEK0_9EURY/383-536 AC A0A4D6HEK0.1
#=GS A0A285P8L0_NATPI/319-474 AC A0A285P8L0.1
#=GS A0A1G9WFM9_9EURY/3-142 AC A0A1G9WFM9.1
#=GS A0A6G3ZLY1_9EURY/7-164 AC A0A6G3ZLY1.1
#=GS M1XTL3_NATM8/323-494 AC M1XTL3.1
#=GS L9W5D0_9EURY/4-148 AC L9W5D0.1
#=GS L9XJ42_9EURY/23-153 AC L9XJ42.1
#=GS L0IDA6_HALRX/8-153 AC L0IDA6.1
#=GS A0A1N7DQ70_9EURY/5-155 AC A0A1N7DQ70.1
#=GS W0JP09_9EURY/557-712 AC W0JP09.1
#=GS A0A7D5GLT6_9EURY/19-172 AC A0A7D5GLT6.1
#=GS A0A0U5GZ79_9EURY/3-150 AC A0A0U5GZ79.1
#=GS A0A897NN28_9EURY/2-144 AC A0A897NN28.1
#=GS A0A6G2G1V7_9EURY/3-149 AC A0A6G2G1V7.1
#=GS A0A1Q1FHE8_9EURY/967-1120 AC A0A1Q1FHE8.1
#=GS A0A7J9SGT4_9EURY/1265-1417 AC A0A7J9SGT4.1
#=GS A0A8J8CU06_9EURY/12-166 AC A0A8J8CU06.1
#=GS A0A6G8TEV3_9EURY/660-815 AC A0A6G8TEV3.1
#=GS A0A1N6Z9S0_9EURY/3-155 AC A0A1N6Z9S0.1
#=GS A0A346PVC1_9EURY/1414-1569 AC A0A346PVC1.1
#=GS A0A6A9TDM7_9EURY/13-169 AC A0A6A9TDM7.1
#=GS D4GP08_HALVD/6-149 AC D4GP08.1
#=GS A0A8J8TCG5_9EURY/325-476 AC A0A8J8TCG5.1
#=GS A0A1I0NP96_9EURY/349-502 AC A0A1I0NP96.1
#=GS A0A346PAS8_9EURY/2-144 AC A0A346PAS8.1
#=GS A0A7D5GGU7_9EURY/37-183 AC A0A7D5GGU7.1
#=GS A0A8J7YLI3_9EURY/6-152 AC A0A8J7YLI3.1
#=GS A0A830F8K0_9EURY/770-925 AC A0A830F8K0.1
#=GS A0A6B0VPX1_9EURY/5-155 AC A0A6B0VPX1.1
#=GS A0A166TVZ0_9EURY/733-888 AC A0A166TVZ0.1
#=GS A0A7D5KG00_9EURY/503-657 AC A0A7D5KG00.1
#=GS A0A365T996_9EURY/5-157 AC A0A365T996.1
#=GS A0A1H6CSH1_9EURY/4-143 AC A0A1H6CSH1.1
#=GS A0A498G2M9_9EURY/1030-1181 AC A0A498G2M9.1
#=GS A0A256IA30_9EURY/291-445 AC A0A256IA30.1
#=GS F8DCJ4_HALXS/7-153 AC F8DCJ4.1
#=GS M0MNV8_HALMO/1-111 AC M0MNV8.1
#=GS A0A4S3TKG0_9EURY/228-376 AC A0A4S3TKG0.1
#=GS A0A6A9SP45_9EURY/21-175 AC A0A6A9SP45.1
#=GS E4NRY9_HALBP/2-153 AC E4NRY9.1
#=GS A0A256KLR4_9EURY/291-417 AC A0A256KLR4.1
#=GS L0I9M9_HALRX/1-156 AC L0I9M9.1
#=GS A0A285N172_NATPI/627-778 AC A0A285N172.1
#=GS A0A1N7DYS1_9EURY/730-885 AC A0A1N7DYS1.1
#=GS A0A1Q1FMT5_9EURY/4-150 AC A0A1Q1FMT5.1
#=GS M0ARL3_NATA1/611-765 AC M0ARL3.1
#=GS L0AGR8_NATGS/356-510 AC L0AGR8.1
#=GS A0A8J8Q9N4_9EURY/487-639 AC A0A8J8Q9N4.1
#=GS M0ATS6_NATA1/2-155 AC M0ATS6.1
#=GS A0A7D5GMH8_9EURY/753-928 AC A0A7D5GMH8.1
#=GS M0M2B6_9EURY/187-341 AC M0M2B6.1
#=GS A0A3N6LSN7_9EURY/490-641 AC A0A3N6LSN7.1
#=GS A0A3N6M091_NATCH/4-152 AC A0A3N6M091.1
#=GS A0A8J8C989_9EURY/653-804 AC A0A8J8C989.1
#=GS A0A7D4Y4M7_9EURY/338-492 AC A0A7D4Y4M7.1
#=GS A0A6G8TEB6_9EURY/3-145 AC A0A6G8TEB6.1
#=GS A0A1H6W218_9EURY/441-598 AC A0A1H6W218.1
#=GS M0MHZ8_9EURY/730-882 AC M0MHZ8.1
#=GS A0A518SEA3_9EURY/173-322 AC A0A518SEA3.1
#=GS C7P3X2_HALMD/3-140 AC C7P3X2.1
#=GS D3SR61_NATMM/541-695 AC D3SR61.1
#=GS A0A0P7GAU7_9EURY/1-62 AC A0A0P7GAU7.1
#=GS A0A1N6XI73_9EURY/3-153 AC A0A1N6XI73.1
#=GS A0A202EB35_9EURY/736-914 AC A0A202EB35.1
#=GS M0MGZ0_9EURY/3-161 AC M0MGZ0.1
#=GS L0AHV1_NATGS/319-473 AC L0AHV1.1
#=GS A0A0W1RDT4_9EURY/732-884 AC A0A0W1RDT4.1
#=GS A0A1H1GKU7_9EURY/5-158 AC A0A1H1GKU7.1
#=GS R4W4A3_9EURY/10-160 AC R4W4A3.1
#=GS A0A1H6BH23_9EURY/390-545 AC A0A1H6BH23.1
#=GS A0A1I0MMD0_9EURY/11-158 AC A0A1I0MMD0.1
#=GS A0A365TEY0_9EURY/6-153 AC A0A365TEY0.1
#=GS U1PLE8_9EURY/444-602 AC U1PLE8.1
#=GS A0A7D5L9M9_9EURY/495-649 AC A0A7D5L9M9.1
#=GS A0A0W1RCW8_9EURY/3-157 AC A0A0W1RCW8.1
#=GS V4X4D6_9ARCH/291-450 AC V4X4D6.1
#=GS A0A6B0T2G7_9EURY/744-897 AC A0A6B0T2G7.1
#=GS A0A1H6R784_9EURY/322-474 AC A0A1H6R784.1
#=GS A0A365T428_9EURY/2-173 AC A0A365T428.1
#=GS A0A8J7YH99_9EURY/3-140 AC A0A8J7YH99.1
#=GS A0A1I0QGD5_9EURY/3-153 AC A0A1I0QGD5.1
#=GS A0A1H3VW28_9EURY/292-445 AC A0A1H3VW28.1
#=GS U1MZ56_9EURY/372-529 AC U1MZ56.1
#=GS A0A1I6LXI8_9EURY/11-167 AC A0A1I6LXI8.1
#=GS A0A1N7FGK3_9EURY/23-168 AC A0A1N7FGK3.1
#=GS G2MM61_9EURY/732-882 AC G2MM61.1
#=GS A0A8J8TRW8_9EURY/1-156 AC A0A8J8TRW8.1
#=GS A0A5N5U5P7_9EURY/2-149 AC A0A5N5U5P7.1
#=GS A0A1H0XY87_9EURY/857-1009 AC A0A1H0XY87.1
#=GS V4Y9X5_9ARCH/291-443 AC V4Y9X5.1
#=GS A0A346PU05_9EURY/344-498 AC A0A346PU05.1
#=GS M0LF16_HALLS/411-564 AC M0LF16.1
#=GS U1NNK7_9EURY/149-296 AC U1NNK7.1
#=GS A0A3A6Q1M3_9EURY/440-593 AC A0A3A6Q1M3.1
#=GS A0A3N6M2V0_NATCH/46-194 AC A0A3N6M2V0.1
#=GS A0A285N383_NATPI/509-664 AC A0A285N383.1
#=GS A0A346PD62_9EURY/728-882 AC A0A346PD62.1
#=GS E4NUJ3_HALBP/478-624 AC E4NUJ3.1
#=GS A0A8J7YGG0_9EURY/470-622 AC A0A8J7YGG0.1
#=GS D2RPA5_HALTV/5-151 AC D2RPA5.1
#=GS A0A8J8Q4S7_9EURY/867-1023 AC A0A8J8Q4S7.1
#=GS A0A1I0NAR5_9EURY/5-139 AC A0A1I0NAR5.1
#=GS A0A1H0YLJ1_9EURY/8-157 AC A0A1H0YLJ1.1
#=GS L0JWZ1_9EURY/343-497 AC L0JWZ1.1
#=GS A0A4D6HE32_9EURY/992-1145 AC A0A4D6HE32.1
#=GS D3SY34_NATMM/12-166 AC D3SY34.1
#=GS A0A8J8Q0H7_9EURY/783-937 AC A0A8J8Q0H7.1
#=GS D2RWZ4_HALTV/345-498 AC D2RWZ4.1
#=GS A0A346PQ25_9EURY/518-673 AC A0A346PQ25.1
#=GS A0A256H8F5_9EURY/1268-1421 AC A0A256H8F5.1
#=GS A0A6B0GHG9_9EURY/3-155 AC A0A6B0GHG9.1
#=GS U1QHK7_9EURY/372-529 AC U1QHK7.1
#=GS A0A256KUC1_9EURY/2-152 AC A0A256KUC1.1
#=GS A0A6G3ZJH1_9EURY/478-632 AC A0A6G3ZJH1.1
#=GS A0A7D5GH31_9EURY/696-852 AC A0A7D5GH31.1
#=GS A0A1I0M1L1_9EURY/461-615 AC A0A1I0M1L1.1
#=GS A0A3N6LRA5_NATCH/3-155 AC A0A3N6LRA5.1
#=GS A0A256ICX9_9EURY/761-913 AC A0A256ICX9.1
#=GS M0CWT0_HALPD/1-157 AC M0CWT0.1
#=GS A0A6A9SM96_9EURY/3-153 AC A0A6A9SM96.1
#=GS L0JWR1_9EURY/1-155 AC L0JWR1.1
#=GS M0LFK2_HALLS/452-606 AC M0LFK2.1
#=GS A0A1H6S592_9EURY/869-1023 AC A0A1H6S592.1
#=GS F8D9D4_HALXS/11-157 AC F8D9D4.1
#=GS A0A6A9SYG8_9EURY/301-454 AC A0A6A9SYG8.1
#=GS F8D6D5_HALXS/6-160 AC F8D6D5.1
#=GS L0JJP2_NATP1/3-150 AC L0JJP2.1
#=GS U3A618_9EURY/761-903 AC U3A618.1
#=GS A0A2R4X126_9EURY/848-1003 AC A0A2R4X126.1
#=GS A0A7D5GSC2_9EURY/12-166 AC A0A7D5GSC2.1
#=GS A0A256HG27_9EURY/3-154 AC A0A256HG27.1
#=GS L9ZKD4_9EURY/317-469 AC L9ZKD4.1
#=GS A0A1I6LXN8_9EURY/510-664 AC A0A1I6LXN8.1
#=GS M0MB63_9EURY/540-695 AC M0MB63.1
#=GS A0A7D5CLP6_9EURY/10-163 AC A0A7D5CLP6.1
#=GS A0A2Z2HX97_9EURY/508-659 AC A0A2Z2HX97.1
#=GS A0A1G9UQV2_9EURY/310-464 AC A0A1G9UQV2.1
#=GS A0A3N6LJZ3_9EURY/402-555 AC A0A3N6LJZ3.1
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